RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 NXPE1Q8N323 547 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 EFHBQ8N7U6 833 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 PLA2G15Q8NCC3 412 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 RTF1Q92541 710 aaKnown RBP7.35□□□□□ -1.23
PRPF39-209ENST00000556353 MYL10Q9BUA6 226 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 HAPLN2Q9GZV7 340 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 POFUT1Q9H488 388 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 MTG2Q9H4K7 406 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 AURKAIP1Q9NWT8 199 aaPredicted RBP7.35□□□□□ -1.23
PRPF39-209ENST00000556353 DNAI1Q9UI46 699 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 GIT1Q9Y2X7 761 aa7.35□□□□□ -1.23
PRPF39-209ENST00000556353 ZNF891A8MT65 544 aaPredicted RBP7.34□□□□□ -1.23
PRPF39-209ENST00000556353 NPIPB8E9PQR5 432 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 PLSCR1O15162 318 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 DAPK3O43293 454 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 DSG1Q02413 1049 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 PTH1RQ03431 593 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 GAGE13Q4V321 117 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 KIAA1841Q6NSI8 718 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 NIM1KQ8IY84 436 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 THEMISQ8N1K5 641 aaPredicted RBP7.34□□□□□ -1.23
PRPF39-209ENST00000556353 GPHA2Q96T91 129 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 PITHD1Q9GZP4 211 aaPredicted RBP7.34□□□□□ -1.23
PRPF39-209ENST00000556353 MTFR1LQ9H019 292 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 ZMAT4Q9H898 229 aa7.34□□□□□ -1.23
PRPF39-209ENST00000556353 THG1LQ9NWX6 298 aaKnown RBP7.34□□□□□ -1.23
PRPF39-209ENST00000556353 MYO15BQ96JP2 1530 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 A0A0A6YYJ9 748 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 FAM83GA6ND36 823 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 CD40P25942 277 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 KRT40Q6A162 431 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 GAREM2Q75VX8 874 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 ANKRD35Q8N283 1001 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 IL17DQ8TAD2 202 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 CHTF18Q8WVB6 975 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 PLEKHG4BQ96PX9 1271 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 FEZ1Q99689 392 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 PLAAQ9Y263 795 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 SH3BP1Q9Y3L3 701 aa7.33□□□□□ -1.24
PRPF39-209ENST00000556353 MRPL42Q9Y6G3 142 aaKnown RBP7.33□□□□□ -1.24
PRPF39-209ENST00000556353 TOX4O94842 621 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 SLPIP03973 132 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 KPNA1P52294 538 aaPredicted RBP7.32□□□□□ -1.24
PRPF39-209ENST00000556353 HMGA2P52926 109 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 ADAM8P78325 824 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 CRHR2Q13324 411 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 LRRC32Q14392 662 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 SART3Q15020 963 aaKnown RBP7.32□□□□□ -1.24
PRPF39-209ENST00000556353 LSM12Q3MHD2 195 aaKnown RBP7.32□□□□□ -1.24
PRPF39-209ENST00000556353 SPTY2D1Q68D10 685 aaPredicted RBP7.32□□□□□ -1.24
PRPF39-209ENST00000556353 UNQ6494/PRO21346Q6UXR6 183 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 NPM2Q86SE8 214 aaKnown RBP7.32□□□□□ -1.24
PRPF39-209ENST00000556353 DHX37Q8IY37 1157 aaKnown RBP7.32□□□□□ -1.24
PRPF39-209ENST00000556353 AHI1Q8N157 1196 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 PPM1KQ8N3J5 372 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 IL23AQ9NPF7 189 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 RCAN3Q9UKA8 241 aa7.32□□□□□ -1.24
PRPF39-209ENST00000556353 UBE2QL1A1L167 161 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 OPHN1O60890 802 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 JUNP05412 331 aaKnown RBP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 C1SP09871 688 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 VSIG10L2P0DP72 767 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 HNRNPLP14866 589 aaKnown RBP eCLIP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 SCNN1BP51168 640 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 MAN2A1Q16706 1144 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 FAM111BQ6SJ93 734 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 MIEF2Q96C03 454 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 HIST1H2AHQ96KK5 128 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 HIST1H2AJQ99878 128 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 TCF25Q9BQ70 676 aa7.31□□□□□ -1.24
PRPF39-209ENST00000556353 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 C14orf93Q9H972 538 aaKnown RBP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 USP36Q9P275 1121 aaKnown RBP7.31□□□□□ -1.24
PRPF39-209ENST00000556353 ZCCHC6Q5VYS8 1495 aaKnown RBP7.3□□□□□ -1.24
PRPF39-209ENST00000556353 KRTAP23-1A1A580 65 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 ZNF202O95125 648 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 DGCR2P98153 550 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 OCRLQ01968 901 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 PCBP1Q15365 356 aaKnown RBP eCLIP7.3□□□□□ -1.24
PRPF39-209ENST00000556353 JAZF1Q86VZ6 243 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 SMC1BQ8NDV3 1235 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 CACTINQ8WUQ7 758 aaKnown RBP7.3□□□□□ -1.24
PRPF39-209ENST00000556353 MFSD3Q96ES6 412 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 TARS2Q9BW92 718 aaKnown RBP7.3□□□□□ -1.24
PRPF39-209ENST00000556353 MRIQ9BWK5 157 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 OSBPL6Q9BZF3 934 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 PCED1AQ9H1Q7 454 aa7.3□□□□□ -1.24
PRPF39-209ENST00000556353 HECAQ9UBI9 543 aaPredicted RBP7.3□□□□□ -1.24
PRPF39-209ENST00000556353 FSBPO95073 299 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 ABHD18Q0P651 414 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 RRP1BQ14684 758 aaKnown RBP7.29□□□□□ -1.24
PRPF39-209ENST00000556353 DALRD3Q5D0E6 543 aaKnown RBP7.29□□□□□ -1.24
PRPF39-209ENST00000556353 ESPNLQ6ZVH7 1005 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 TMPRSS6Q8IU80 811 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 OR2W6PQ8NHA6 318 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 FERMT2Q96AC1 680 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 GPR101Q96P66 508 aaPredicted RBP7.29□□□□□ -1.24
PRPF39-209ENST00000556353 UIMC1Q96RL1 719 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms