RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SEPT14Q6ZU15 432 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 CHST3Q7LGC8 479 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 SERINC5Q86VE9 423 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 EFHBQ8N7U6 833 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 FAM200AQ8TCP9 573 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 DCAF4Q8WV16 495 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 NKD2Q969F2 451 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-236ENST00000556220 OSBP2Q969R2 916 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 MYO19Q96H55 970 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 EPB41L4AQ9HCS5 686 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-236ENST00000556220 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 USP15Q9Y4E8 981 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-236ENST00000556220 MICAL3Q7RTP6 2002 aa8.05□□□□□ -1.12
ATXN3-236ENST00000556220 CEP250Q9BV73 2442 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 MED19A0JLT2 244 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-236ENST00000556220 MICAL2O94851 1124 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 PDGFBP01127 241 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-236ENST00000556220 APPP05067 770 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 ATF7P17544 494 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-236ENST00000556220 GNAT2P19087 354 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 GRNP28799 593 aaKnown RBP8.04□□□□□ -1.12
ATXN3-236ENST00000556220 SLC16A2P36021 539 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 PTPN21Q16825 1174 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 SYDE2Q5VT97 1194 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 RASGRP2Q7LDG7 609 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 FRMD5Q7Z6J6 570 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 FAM35AQ86V20 835 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 ITPRIPQ8IWB1 547 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 DHX37Q8IY37 1157 aaKnown RBP8.04□□□□□ -1.12
ATXN3-236ENST00000556220 IFNL3Q8IZI9 196 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 RGS22Q8NE09 1264 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 PPTC7Q8NI37 304 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 BCL11AQ9H165 835 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 IL17RBQ9NRM6 502 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 FRRS1LQ9P0K9 344 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 DDX41Q9UJV9 622 aaKnown RBP8.04□□□□□ -1.12
ATXN3-236ENST00000556220 NAGPAQ9UK23 515 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 STX8Q9UNK0 236 aa8.04□□□□□ -1.12
ATXN3-236ENST00000556220 COL4A6Q14031 1691 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 GPAA1O43292 621 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 DYRK3O43781 588 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 RAB11FIP3O75154 756 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 CAND2O75155 1236 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 PPFIA4O75335 1185 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 CSPG5O95196 566 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 SLC3A2P08195 630 aaKnown RBP8.03□□□□□ -1.12
ATXN3-236ENST00000556220 ZNF286BP0CG31 522 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 HOXD8P13378 290 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-236ENST00000556220 DNAJB1P25685 340 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 NOVP48745 357 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 NAALADL2Q58DX5 795 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 ZMYM1Q5SVZ6 1142 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 MCTP2Q6DN12 878 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 FTSJ3Q8IY81 847 aaKnown RBP8.03□□□□□ -1.12
ATXN3-236ENST00000556220 SPPL3Q8TCT6 385 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 SUSD6Q92537 303 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 APPBP2Q92624 585 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 APBB2Q92870 758 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 P2RX5Q93086 422 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
ATXN3-236ENST00000556220 OSBPL7Q9BZF2 842 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 MTMR7Q9Y216 660 aa8.03□□□□□ -1.12
ATXN3-236ENST00000556220 ZNF292O60281 2723 aa8.02□□□□□ -1.12
ATXN3-236ENST00000556220 C17orf102A2RUQ5 167 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 TSPY2A6NKD2 308 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 NMT2O60551 498 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 EIF3JO75822 258 aaKnown RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 GLP2RO95838 553 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 RLBP1P12271 317 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 NRIP1P48552 1158 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 STXBP2Q15833 593 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 DGLUCYQ7Z3D6 616 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 ADGRD2Q7Z7M1 963 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 RBM23Q86U06 439 aaKnown RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 DMRTC2Q8IXT2 367 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 FMR1NBQ8N0W7 255 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 DTWD1Q8N5C7 304 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 TMEM105Q8N8V8 129 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 NSUN6Q8TEA1 469 aaKnown RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 ATP6V0A1Q93050 837 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 ZNF689Q96CS4 500 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 RMDN1Q96DB5 314 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 TAAR1Q96RJ0 339 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 IWS1Q96ST2 819 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 NACAP1Q9BZK3 213 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 MAF1Q9H063 256 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 RC3H2Q9HBD1 1191 aaKnown RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 ZFATQ9P243 1243 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 BARX2Q9UMQ3 279 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-236ENST00000556220 PLXNA3P51805 1871 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 ADGRA3Q8IWK6 1321 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 WDR19Q8NEZ3 1342 aa8.02□□□□□ -1.13
ATXN3-236ENST00000556220 ENPP3O14638 875 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 RNF113AO15541 343 aaKnown RBP8.01□□□□□ -1.13
ATXN3-236ENST00000556220 TREHO43280 583 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 ITGB1P05556 798 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 CTSHP09668 335 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms