RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SEPT9Q9UHD8 586 aaPredicted RBP16.12■□□□□ 0.17
VPS33B-205ENST00000556096 KCNG1Q9UIX4 513 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
VPS33B-205ENST00000556096 FRMD4BQ9Y2L6 1034 aa16.12■□□□□ 0.17
VPS33B-205ENST00000556096 ASB14A6NK59 587 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 NDUFA10O95299 355 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 OATP04181 439 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ATP4AP20648 1035 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 DMP1Q13316 513 aaPredicted RBP16.11■□□□□ 0.17
VPS33B-205ENST00000556096 WDR78Q5VTH9 848 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 TRMT1LQ7Z2T5 733 aaKnown RBP16.11■□□□□ 0.17
VPS33B-205ENST00000556096 AFAP1L1Q8TED9 768 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 SEPT1Q8WYJ6 367 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ZNF592Q92610 1267 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 SLC35C1Q96A29 364 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 IKZF4Q9H2S9 585 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 EFCC1Q9HA90 598 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 PLCB1Q9NQ66 1216 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ARID2Q68CP9 1835 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 PHLPP2Q6ZVD8 1323 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 GTPBP10A4D1E9 387 aaKnown RBP16.11■□□□□ 0.17
VPS33B-205ENST00000556096 SLC16A4O15374 487 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 SORBS3O60504 671 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 TLR2O60603 784 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 NOL4O94818 638 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 GGPS1O95749 300 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ABCD1P33897 745 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 GTF2F1P35269 517 aaKnown RBP eCLIP16.11■□□□□ 0.17
VPS33B-205ENST00000556096 NPTX2P47972 431 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 PPP2R5AQ15172 486 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 FAM160B1Q5W0V3 765 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 SYT10Q6XYQ8 523 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ABRAQ8N0Z2 381 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 TMEM161BQ8NDZ6 487 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 SYN2Q92777 582 aaPredicted RBP16.11■□□□□ 0.17
VPS33B-205ENST00000556096 LSM14BQ9BX40 385 aaKnown RBP16.11■□□□□ 0.17
VPS33B-205ENST00000556096 XPNPEP1Q9NQW7 623 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 EXOC7Q9UPT5 735 aa16.11■□□□□ 0.17
VPS33B-205ENST00000556096 ZSWIM8A7E2V4 1837 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 RIOK3O14730 519 aaKnown RBP16.1■□□□□ 0.17
VPS33B-205ENST00000556096 STRNO43815 780 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
VPS33B-205ENST00000556096 FAM110CQ1W6H9 321 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 PDXDC1Q6P996 788 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 CACNA2D4Q7Z3S7 1137 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 KCNN1Q92952 543 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 PCYT2Q99447 389 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 KMT5AQ9NQR1 393 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 NRBP2Q9NSY0 501 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
VPS33B-205ENST00000556096 MCM3APO60318 1980 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 H0YCG3 227 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 MAPK13O15264 365 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 SCP2P22307 547 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 CYP2J2P51589 502 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 STAT5BP51692 787 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 LY6KQ17RY6 165 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 ZNF792Q3KQV3 632 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 MTERF2Q49AM1 385 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 DCAF17Q5H9S7 520 aaPredicted RBP16.09■□□□□ 0.17
VPS33B-205ENST00000556096 CELF3Q5SZQ8 465 aaKnown RBP16.09■□□□□ 0.17
VPS33B-205ENST00000556096 DPY19L2P1Q6NXN4 242 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 CCDC62Q6P9F0 684 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 C17orf99Q6UX52 265 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 RRAGAQ7L523 313 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 MAP4K3Q8IVH8 894 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 ACRBPQ8NEB7 543 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 DHX33Q9H6R0 707 aaKnown RBP16.09■□□□□ 0.17
VPS33B-205ENST00000556096 NHEJ1Q9H9Q4 299 aaPredicted RBP16.09■□□□□ 0.17
VPS33B-205ENST00000556096 SAGE1Q9NXZ1 904 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 TBX20Q9UMR3 447 aa16.09■□□□□ 0.17
VPS33B-205ENST00000556096 MYH9P35579 1960 aaKnown RBP16.09■□□□□ 0.17
VPS33B-205ENST00000556096 UQCRHLA0A096LP55 91 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 LRRC53A6NM62 1247 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 CCDC169A6NNP5 214 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 EIF3CLB5ME19 914 aaKnown RBP16.08■□□□□ 0.17
VPS33B-205ENST00000556096 EXOC3O60645 756 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 ARIH2O95376 493 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 UQCRHP07919 91 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 MCCD1P59942 119 aaPredicted RBP16.08■□□□□ 0.17
VPS33B-205ENST00000556096 KRT83P78385 493 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 CAP1Q01518 475 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 EXOC3L4Q17RC7 722 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 TCERG1LQ5VWI1 586 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 GBP6Q6ZN66 633 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 ZNF662Q6ZS27 426 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 BSNDQ8WZ55 320 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 IFT74Q96LB3 600 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 CEP89Q96ST8 783 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 EIF3CQ99613 913 aaKnown RBP16.08■□□□□ 0.17
VPS33B-205ENST00000556096 CRACR2AQ9BSW2 395 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 GANQ9H2C0 597 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 FBXL5Q9UKA1 691 aa16.08■□□□□ 0.17
VPS33B-205ENST00000556096 MGAMO43451 1857 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 GPR25O00155 361 aa16.08■□□□□ 0.16
VPS33B-205ENST00000556096 LGR5O75473 907 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms