RNA–Protein interactions for RNA: ENST00000555837.5

CDKN3-208, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2

Gene CDKN3, Length 689 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-208ENST00000555837 RAB27AP51159 221 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 HYIQ5T013 277 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 ZBTB8OSQ8IWT0 167 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 FIBCD1Q8N539 461 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 SP7Q8TDD2 431 aaPredicted RBP25.38■■□□□ 1.65
CDKN3-208ENST00000555837 CDX2Q99626 313 aaPredicted RBP25.38■■□□□ 1.65
CDKN3-208ENST00000555837 TMX1Q9H3N1 280 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 TMEM161AQ9NX61 479 aa25.38■■□□□ 1.65
CDKN3-208ENST00000555837 ARID2Q68CP9 1835 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 EOMESO95936 686 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 ZSCAN22P10073 491 aaPredicted RBP25.37■■□□□ 1.65
CDKN3-208ENST00000555837 MYOGP15173 224 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 TAP1Q03518 808 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 ZRSR1Q15695 479 aaKnown RBP25.37■■□□□ 1.65
CDKN3-208ENST00000555837 IL17AQ16552 155 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 FAM102BQ5T8I3 360 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 CABP7Q86V35 215 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 IFNLR1Q8IU57 520 aaPredicted RBP25.37■■□□□ 1.65
CDKN3-208ENST00000555837 TRAIPQ9BWF2 469 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 POLR3FQ9H1D9 316 aaPredicted RBP25.37■■□□□ 1.65
CDKN3-208ENST00000555837 IFT122Q9HBG6 1241 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 XPNPEP1Q9NQW7 623 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 BMP2KQ9NSY1 1161 aaPredicted RBP25.37■■□□□ 1.65
CDKN3-208ENST00000555837 CCDC39Q9UFE4 941 aa25.37■■□□□ 1.65
CDKN3-208ENST00000555837 COL4A6Q14031 1691 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 CARNS1A5YM72 827 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 C9IYK1 514 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 GTPBP6O43824 516 aaPredicted RBP25.36■■□□□ 1.65
CDKN3-208ENST00000555837 DGKIO75912 1065 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 FOSL2P15408 326 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 PTENP60484 403 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 FAM189BP81408 668 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 BTG3Q14201 252 aaPredicted RBP25.36■■□□□ 1.65
CDKN3-208ENST00000555837 CMTR2Q8IYT2 770 aaKnown RBP25.36■■□□□ 1.65
CDKN3-208ENST00000555837 ABI1Q8IZP0 508 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 CCDC51Q96ER9 411 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 DRC1Q96MC2 740 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 C17orf75Q9HAS0 396 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 CFAP45Q9UL16 551 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 ATP6V1DQ9Y5K8 247 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 LAMA2P24043 3122 aaKnown RBP25.36■■□□□ 1.65
CDKN3-208ENST00000555837 ADGRA3Q8IWK6 1321 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 TTC3P53804 2025 aa25.36■■□□□ 1.65
CDKN3-208ENST00000555837 GBF1Q92538 1859 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 LINC01553A4QN01 128 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 ERVK-21P61565 698 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 DSC3Q14574 896 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 GRIN2CQ14957 1233 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 TWF2Q6IBS0 349 aaKnown RBP25.35■■□□□ 1.65
CDKN3-208ENST00000555837 RTN4RL1Q86UN2 441 aaPredicted RBP25.35■■□□□ 1.65
CDKN3-208ENST00000555837 KSR1Q8IVT5 923 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 CNNM3Q8NE01 707 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 ZNF668Q96K58 619 aaPredicted RBP25.35■■□□□ 1.65
CDKN3-208ENST00000555837 GUCD1Q96NT3 240 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 AAASQ9NRG9 546 aa25.35■■□□□ 1.65
CDKN3-208ENST00000555837 PIN4Q9Y237 131 aaKnown RBP25.35■■□□□ 1.65
CDKN3-208ENST00000555837 SRPRBQ9Y5M8 271 aaKnown RBP25.35■■□□□ 1.65
CDKN3-208ENST00000555837 A0A0U1RQF3 1178 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 INO80B-WBP1J3KQ70 363 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 SLC39A14Q15043 492 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 STK38Q15208 465 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 TMCO2Q7Z6W1 182 aaPredicted RBP25.34■■□□□ 1.65
CDKN3-208ENST00000555837 HACE1Q8IYU2 909 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 LINC01599Q8WXQ3 324 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 PGBD4Q96DM1 585 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 PRIMPOLQ96LW4 560 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 AGPAT5Q9NUQ2 364 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 CLIC4Q9Y696 253 aa25.34■■□□□ 1.65
CDKN3-208ENST00000555837 LRRIQ4A6NIV6 560 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 PP2D1A8MPX8 630 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 RB1P06400 928 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 NAMPTP43490 491 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 EFNA5P52803 228 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 KRI1Q8N9T8 703 aaKnown RBP25.33■■□□□ 1.65
CDKN3-208ENST00000555837 DEPTORQ8TB45 409 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 ARNTL2Q8WYA1 636 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 MMTAG2Q9BU76 263 aaKnown RBP25.33■■□□□ 1.65
CDKN3-208ENST00000555837 CCSER1Q9C0I3 900 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 PRDM12Q9H4Q4 367 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 PRMT7Q9NVM4 692 aaPredicted RBP25.33■■□□□ 1.65
CDKN3-208ENST00000555837 LMCD1Q9NZU5 365 aa25.33■■□□□ 1.65
CDKN3-208ENST00000555837 YEATS4O95619 227 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 F13A1P00488 732 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 GLRA2P23416 452 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 CDC25AP30304 524 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 NASPP49321 788 aaPredicted RBP25.32■■□□□ 1.64
CDKN3-208ENST00000555837 CAPSQ13938 189 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 PTPAQ15257 358 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 CSPP1Q1MSJ5 1256 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 NOTUMQ6P988 496 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 MAEAQ7L5Y9 396 aa25.32■■□□□ 1.64
CDKN3-208ENST00000555837 APBB1IPQ7Z5R6 666 aaPredicted RBP25.32■■□□□ 1.64
CDKN3-208ENST00000555837 ZNF689Q96CS4 500 aaPredicted RBP25.32■■□□□ 1.64
CDKN3-208ENST00000555837 A0A087WWV3 80 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 E9PMD0 336 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 MGEA5O60502 916 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 SCP2P22307 547 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 CEBPZQ03701 1054 aaKnown RBP25.31■■□□□ 1.64
CDKN3-208ENST00000555837 ECM1Q16610 540 aa25.31■■□□□ 1.64
CDKN3-208ENST00000555837 NAALADL2Q58DX5 795 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms