RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ZNF579Q8NAF0 562 aaKnown RBP27.33■■□□□ 1.97
PRKCH-216ENST00000555542 SPPL3Q8TCT6 385 aa27.33■■□□□ 1.97
PRKCH-216ENST00000555542 POF1BQ8WVV4 589 aa27.33■■□□□ 1.97
PRKCH-216ENST00000555542 EIF2AK1Q9BQI3 630 aaKnown RBP27.33■■□□□ 1.97
PRKCH-216ENST00000555542 IGFLR1Q9H665 355 aa27.33■■□□□ 1.97
PRKCH-216ENST00000555542 COL4A3BPQ9Y5P4 624 aa27.33■■□□□ 1.97
PRKCH-216ENST00000555542 MCM7P33993 719 aa27.32■■□□□ 1.96
PRKCH-216ENST00000555542 TWF2Q6IBS0 349 aaKnown RBP27.32■■□□□ 1.96
PRKCH-216ENST00000555542 CATSPER4Q7RTX7 472 aa27.32■■□□□ 1.96
PRKCH-216ENST00000555542 PSPC1Q8WXF1 523 aaKnown RBP27.32■■□□□ 1.96
PRKCH-216ENST00000555542 TMEM143Q96AN5 459 aa27.32■■□□□ 1.96
PRKCH-216ENST00000555542 CHST12Q9NRB3 414 aa27.32■■□□□ 1.96
PRKCH-216ENST00000555542 HCSTQ9UBK5 93 aa27.32■■□□□ 1.96
PRKCH-216ENST00000555542 PIN4Q9Y237 131 aaKnown RBP27.32■■□□□ 1.96
PRKCH-216ENST00000555542 ARID2Q68CP9 1835 aa27.32■■□□□ 1.96
PRKCH-216ENST00000555542 LAG3P18627 525 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 EMC2Q15006 297 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 CSPP1Q1MSJ5 1256 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 PTCRAQ6ISU1 281 aaPredicted RBP27.31■■□□□ 1.96
PRKCH-216ENST00000555542 LRRC43Q8N309 656 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 COLGALT1Q8NBJ5 622 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 NEK9Q8TD19 979 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 MICAL1Q8TDZ2 1067 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 TCP11Q8WWU5 503 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 KIF2CQ99661 725 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 DHX33Q9H6R0 707 aaKnown RBP27.31■■□□□ 1.96
PRKCH-216ENST00000555542 PLXNA4Q9HCM2 1894 aa27.31■■□□□ 1.96
PRKCH-216ENST00000555542 BRWD1Q9NSI6 2320 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 A0A0U1RQF3 1178 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 WNT7AO00755 349 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 GAS2O43903 313 aaKnown RBP27.3■■□□□ 1.96
PRKCH-216ENST00000555542 SLITRK3O94933 977 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 SRGAP2CP0DJJ0 459 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 DNAJB1P25685 340 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 HYAL1Q12794 435 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.3■■□□□ 1.96
PRKCH-216ENST00000555542 MTRQ99707 1265 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 UPF2Q9HAU5 1272 aaKnown RBP27.3■■□□□ 1.96
PRKCH-216ENST00000555542 TTC28Q96AY4 2481 aa27.3■■□□□ 1.96
PRKCH-216ENST00000555542 FGF18O76093 207 aa27.29■■□□□ 1.96
PRKCH-216ENST00000555542 EOMESO95936 686 aa27.29■■□□□ 1.96
PRKCH-216ENST00000555542 CAMK1Q14012 370 aa27.29■■□□□ 1.96
PRKCH-216ENST00000555542 PUS10Q3MIT2 529 aaKnown RBP27.29■■□□□ 1.96
PRKCH-216ENST00000555542 PRPF31Q8WWY3 499 aaKnown RBP27.29■■□□□ 1.96
PRKCH-216ENST00000555542 CASD1Q96PB1 797 aa27.29■■□□□ 1.96
PRKCH-216ENST00000555542 MYO7AQ13402 2215 aa27.29■■□□□ 1.96
PRKCH-216ENST00000555542 ZBTB39O15060 712 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 IRS1P35568 1242 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 RBM25P49756 843 aaKnown RBP27.28■■□□□ 1.96
PRKCH-216ENST00000555542 UBE3AQ05086 875 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 HELQQ8TDG4 1101 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 MTMR9Q96QG7 549 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 FOXP1Q9H334 677 aaPredicted RBP27.28■■□□□ 1.96
PRKCH-216ENST00000555542 CWH43Q9H720 699 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 RNF19AQ9NV58 838 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 FAM50BQ9Y247 325 aa27.28■■□□□ 1.96
PRKCH-216ENST00000555542 SKIP12755 728 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 IL9P15248 144 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 GTF2F1P35269 517 aaKnown RBP eCLIP27.27■■□□□ 1.96
PRKCH-216ENST00000555542 LAMTOR4Q0VGL1 99 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 RABEP1Q15276 862 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 CLLU1OSQ5K130 101 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 IFT122Q9HBG6 1241 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 TLR9Q9NR96 1032 aa27.27■■□□□ 1.96
PRKCH-216ENST00000555542 POTEMA6NI47 508 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 ST18O60284 1047 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 PHKA2P46019 1235 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 COL19A1Q14993 1142 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 SRGAP1Q7Z6B7 1085 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 RNF149Q8NC42 400 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 FBXO18Q8NFZ0 1043 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 ZNF558Q96NG5 402 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 HSD17B14Q9BPX1 270 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 MRPL9Q9BYD2 267 aaKnown RBP27.26■■□□□ 1.95
PRKCH-216ENST00000555542 TMEM60Q9H2L4 133 aa27.26■■□□□ 1.95
PRKCH-216ENST00000555542 GRXCR2A6NFK2 248 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 ASAP2O43150 1006 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 NDUFV1P49821 464 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 RAB27AP51159 221 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 ZNF174Q15697 407 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 CLUL1Q15846 466 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 LONRF3Q496Y0 759 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 LRRC55Q6ZSA7 311 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 ADGRD2Q7Z7M1 963 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 RBM23Q86U06 439 aaKnown RBP27.25■■□□□ 1.95
PRKCH-216ENST00000555542 ZNF598Q86UK7 904 aaKnown RBP27.25■■□□□ 1.95
PRKCH-216ENST00000555542 FERMT3Q86UX7 667 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 ANKEF1Q9NU02 776 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 FAM105AQ9NUU6 356 aa27.25■■□□□ 1.95
PRKCH-216ENST00000555542 PUF60Q9UHX1 559 aaKnown RBP27.25■■□□□ 1.95
PRKCH-216ENST00000555542 NOL7Q9UMY1 257 aaKnown RBP27.25■■□□□ 1.95
PRKCH-216ENST00000555542 LYPLA2O95372 231 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 ATF7P17544 494 aaPredicted RBP27.24■■□□□ 1.95
PRKCH-216ENST00000555542 PPM1AP35813 382 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 NRIP1P48552 1158 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 TTC38Q5R3I4 469 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 KCNT2Q6UVM3 1135 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 AGPAT5Q9NUQ2 364 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 PCDHGC5Q9Y5F6 944 aa27.24■■□□□ 1.95
PRKCH-216ENST00000555542 LINC01565O15544 149 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms