RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 IBSPP21815 317 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 MCM7P33993 719 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 TRAPPC10P48553 1259 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 GATMP50440 423 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 CYP4A11Q02928 519 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 UBE3AQ05086 875 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 GNL2Q13823 731 aaKnown RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 CSPP1Q1MSJ5 1256 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 SPOUT1Q5T280 376 aaKnown RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 SRGAP1Q7Z6B7 1085 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 ECHDC2Q86YB7 292 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 ZNF579Q8NAF0 562 aaKnown RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 SPPL3Q8TCT6 385 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 ADAMTS19Q8TE59 1207 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 PRPF31Q8WWY3 499 aaKnown RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 PSPC1Q8WXF1 523 aaKnown RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 RSPH1Q8WYR4 309 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 PPP2R3CQ969Q6 453 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 PABPC5Q96DU9 382 aaKnown RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 UHRF1Q96T88 793 aaPredicted RBP9.74□□□□□ -0.85
ACTN1-213ENST00000554508 TMEM117Q9H0C3 514 aa9.74□□□□□ -0.85
ACTN1-213ENST00000554508 WNT7AO00755 349 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 ITGB1P05556 798 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 ATP2B1P20020 1258 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 FGFR4P22455 802 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 U2AF2P26368 475 aaKnown RBP eCLIP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 MCM2P49736 904 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 KCNQ1P51787 676 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 POU5F1BQ06416 359 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 LAMTOR4Q0VGL1 99 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 MXD4Q14582 209 aaPredicted RBP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 COL19A1Q14993 1142 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 EMC2Q15006 297 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 PCBP1Q15365 356 aaKnown RBP eCLIP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 ZNF174Q15697 407 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 LEXMQ3ZCV2 418 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 TCEAL5Q5H9L2 206 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 CATSPER4Q7RTX7 472 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 FERMT3Q86UX7 667 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 KSR1Q8IVT5 923 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 ABI1Q8IZP0 508 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 KLHL23Q8NBE8 558 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 ERMNQ8TAM6 284 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 POF1BQ8WVV4 589 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 NLRP4Q96MN2 994 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 CCDC43Q96MW1 224 aaKnown RBP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 CASD1Q96PB1 797 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 MTRQ99707 1265 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 TMEM60Q9H2L4 133 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 IFT122Q9HBG6 1241 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 TUFT1Q9NNX1 390 aa9.73□□□□□ -0.85
ACTN1-213ENST00000554508 ALG13Q9NP73 1137 aaKnown RBP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 TYW1Q9NV66 732 aaKnown RBP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
ACTN1-213ENST00000554508 XIRP2A4UGR9 3374 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 CARNS1A5YM72 827 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 ZBTB39O15060 712 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 ZNF623O75123 536 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 CSDE1O75534 798 aaKnown RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 DGAT1O75907 488 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 OR52Z1P0C646 297 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 SRGAP2CP0DJJ0 459 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 FGFR1P11362 822 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 LAG3P18627 525 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 MUTP22033 750 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 TECP42680 631 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 PHKA2P46019 1235 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 RAB27AP51159 221 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 CAMK1Q14012 370 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 TFDP1Q14186 410 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 TTC38Q5R3I4 469 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 TWF2Q6IBS0 349 aaKnown RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 PDE12Q6L8Q7 609 aaKnown RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 LRRC43Q8N309 656 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 COLGALT1Q8NBJ5 622 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 TMEM143Q96AN5 459 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 TMX3Q96JJ7 454 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 NACC1Q96RE7 527 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 POLR3CQ9BUI4 534 aaPredicted RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 MRPL9Q9BYD2 267 aaKnown RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 CWH43Q9H720 699 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 RNF19AQ9NV58 838 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 PIN4Q9Y237 131 aaKnown RBP9.72□□□□□ -0.85
ACTN1-213ENST00000554508 LZTS1Q9Y250 596 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 STK24Q9Y6E0 443 aa9.72□□□□□ -0.85
ACTN1-213ENST00000554508 POTEMA6NI47 508 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 SPATA31C1P0DKV0 1188 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 KCNA5P22460 613 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 DNAJB1P25685 340 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 RPA1P27694 616 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 RARRES1P49788 294 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 PTENP60484 403 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 PLCB3Q01970 1234 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
ACTN1-213ENST00000554508 PDIA5Q14554 519 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 CTC1Q2NKJ3 1217 aa9.71□□□□□ -0.86
ACTN1-213ENST00000554508 CLLU1OSQ5K130 101 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms