RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GTF2A2P52657 109 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 EVA1CP58658 441 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 ZC3H6P61129 1189 aaKnown RBP5.28□□□□□ -1.56
ATXN3-227ENST00000554491 DDB1Q16531 1140 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 FAM178BQ8IXR5 827 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 TMEM145Q8NBT3 493 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 MICAL1Q8TDZ2 1067 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 KISS1RQ969F8 398 aaPredicted RBP5.28□□□□□ -1.56
ATXN3-227ENST00000554491 CHAMP1Q96JM3 812 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 CLIC6Q96NY7 704 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 KLC2Q9H0B6 622 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 TMEM168Q9H0V1 697 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 CLDND1Q9NY35 253 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 GOLGA6AQ9NYA3 693 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 LRP2BPQ9P2M1 347 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 STRIP2Q9ULQ0 834 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 INPP5FQ9Y2H2 1132 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 TSC22D4Q9Y3Q8 395 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 KAT6BQ8WYB5 2073 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 KIAA1551Q9HCM1 1747 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 ANKRD30BQ9BXX2 1392 aa5.28□□□□□ -1.56
ATXN3-227ENST00000554491 PNPLA7Q6ZV29 1317 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 KIF16BQ96L93 1317 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 NPEPPSL1A6NEC2 478 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 TULP2O00295 520 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 COQ9O75208 318 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 TACR2P21452 398 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 LTBRP36941 435 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 GFRA1P56159 465 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 LSAMPQ13449 338 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 TESK1Q15569 626 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 ACBD5Q5T8D3 534 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-227ENST00000554491 LARP1BQ659C4 914 aaKnown RBP5.27□□□□□ -1.57
ATXN3-227ENST00000554491 MRM1Q6IN84 353 aaKnown RBP5.27□□□□□ -1.57
ATXN3-227ENST00000554491 PKN3Q6P5Z2 889 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 TMC5Q6UXY8 1006 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 KRBA2Q6ZNG9 492 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 APBB1IPQ7Z5R6 666 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-227ENST00000554491 KBTBD2Q8IY47 623 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 DNERQ8NFT8 737 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 DOT1LQ8TEK3 1739 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.27□□□□□ -1.57
ATXN3-227ENST00000554491 C1orf159Q96HA4 380 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 SORCS2Q96PQ0 1159 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 DONSONQ9NYP3 566 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 KIAA1522Q9P206 1035 aaPredicted RBP5.27□□□□□ -1.57
ATXN3-227ENST00000554491 SRRDQ9UH36 339 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 C5P01031 1676 aa5.27□□□□□ -1.57
ATXN3-227ENST00000554491 PDE4DIPQ5VU43 2346 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 BRCA1P38398 1863 aaKnown RBP5.26□□□□□ -1.57
ATXN3-227ENST00000554491 C10orf71Q711Q0 1435 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 KIF13BQ9NQT8 1826 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 H7BY64 318 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 MPHOSPH10O00566 681 aaKnown RBP5.26□□□□□ -1.57
ATXN3-227ENST00000554491 DYNC1I1O14576 645 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 IPO8O15397 1037 aaKnown RBP5.26□□□□□ -1.57
ATXN3-227ENST00000554491 SUV39H1O43463 412 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 SUSD5O60279 629 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 SLPIP03973 132 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 ATF4P18848 351 aaPredicted RBP5.26□□□□□ -1.57
ATXN3-227ENST00000554491 SURF1Q15526 300 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 LONRF3Q496Y0 759 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 EMC4Q5J8M3 183 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 PHF19Q5T6S3 580 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 WDR78Q5VTH9 848 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 ZNF280DQ6N043 979 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 ZNF585AQ6P3V2 769 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 PLEKHH3Q7Z736 793 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 MRRFQ96E11 262 aaKnown RBP5.26□□□□□ -1.57
ATXN3-227ENST00000554491 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 TGIF2Q9GZN2 237 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 CDIP1Q9H305 208 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 MYOTQ9UBF9 498 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 KNSTRNQ9Y448 316 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 KIF3AQ9Y496 699 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 SLIT3O75094 1523 aa5.26□□□□□ -1.57
ATXN3-227ENST00000554491 USP19O94966 1318 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 ADGRF5Q8IZF2 1346 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 TAF1LQ8IZX4 1826 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 KLHL33A6NCF5 533 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CTAGE5O15320 804 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 DHX16O60231 1041 aaKnown RBP5.25□□□□□ -1.57
ATXN3-227ENST00000554491 B4GALT4O60513 344 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 DGKIO75912 1065 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CPP00450 1065 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 GRIA2P42262 883 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 EPHB4P54760 987 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 RIPK4P57078 832 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 PPP2CBP62714 309 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 PPP2CAP67775 309 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CDC37Q16543 378 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CT47A1Q5JQC4 288 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-227ENST00000554491 SLC35F1Q5T1Q4 408 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CRIP3Q6Q6R5 217 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 CIR1Q86X95 450 aaPredicted RBP5.25□□□□□ -1.57
ATXN3-227ENST00000554491 ZFPM1Q8IX07 1006 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 PALM2Q8IXS6 379 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 TIGD1Q96MW7 591 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 TMEM209Q96SK2 561 aa5.25□□□□□ -1.57
ATXN3-227ENST00000554491 HIRIP3Q9BW71 556 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms