RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CALUO43852 315 aaPredicted RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 RPLP2P05387 115 aaKnown RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 SMIM10L2AP0DMW4 78 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 SMIM10L2BP0DMW5 78 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 MYBP10242 640 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 GNAT1P11488 350 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 GLRA2P23416 452 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 EEF1GP26641 437 aaKnown RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 NMT1P30419 496 aaKnown RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 EFNA5P52803 228 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 PMS1P54277 932 aaKnown RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 CDC42EP1Q00587 391 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 FKBP3Q00688 224 aaKnown RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 POU5F1BQ06416 359 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 TFDP1Q14186 410 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 MYBPC2Q14324 1141 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 LRRC41Q15345 812 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 CDCA2Q69YH5 1023 aaPredicted RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 CCSAPQ6IQ19 270 aaPredicted RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 MTHFD1LQ6UB35 978 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 MAEAQ7L5Y9 396 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 HS2ST1Q7LGA3 356 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 RNF180Q86T96 592 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 MAP4K3Q8IVH8 894 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 CSGALNACT2Q8N6G5 542 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 ANKRD20A12PQ8NF67 263 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 LMBR1Q8WVP7 490 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 TMEM143Q96AN5 459 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 CEP63Q96MT8 703 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 ACCSQ96QU6 501 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 CTAGE1Q96RT6 745 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 MAP7D2Q96T17 732 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 TSEN34Q9BSV6 310 aaKnown RBP8.42□□□□□ -1.06
TDP1-209ENST00000554180 NFKBIZQ9BYH8 718 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 GBP3Q9H0R5 595 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 C2orf40Q9H1Z8 148 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 SEMA6BQ9H3T3 888 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 KMT5AQ9NQR1 393 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 FANCLQ9NW38 375 aa8.42□□□□□ -1.06
TDP1-209ENST00000554180 ZMYM2Q9UBW7 1377 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 ADGRA3Q8IWK6 1321 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SMIM35A0A1B0GVV1 85 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 DENND3A2RUS2 1198 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 TRIM49BA6NDI0 452 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 MYADML2A6NDP7 307 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 CCDC169A6NNP5 214 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SLC16A4O15374 487 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 PRPF6O94906 941 aaKnown RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 GNA14O95837 355 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 PGK1P00558 417 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 TPM3P06753 285 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 RPL13P26373 211 aaKnown RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 KLRC1P26715 233 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 HOXD13P35453 343 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SOX10P56693 466 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 ADAM17P78536 824 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 LAMTOR4Q0VGL1 99 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 MKRN4PQ13434 485 aaPredicted RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 CAPSQ13938 189 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SLC9C1Q4G0N8 1177 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 ZC2HC1CQ53FD0 456 aaPredicted RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 MARCH8Q5T0T0 291 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 ANKRD40Q6AI12 368 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 EFCAB12Q6NXP0 572 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 NFRKBQ6P4R8 1299 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 LRRC55Q6ZSA7 311 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 CTU1Q7Z7A3 348 aaKnown RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 ZNF410Q86VK4 478 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SESTD1Q86VW0 696 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SLC9A9Q8IVB4 645 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 NELFCDQ8IXH7 590 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 C12orf56Q8IXR9 622 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 LRRC71Q8N4P6 559 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 C7orf31Q8N865 590 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 DEPTORQ8TB45 409 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 ASAP3Q8TDY4 903 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 TRAPPC12Q8WVT3 735 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 PRPF31Q8WWY3 499 aaKnown RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 DUSP9Q99956 384 aaKnown RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 SEZ6LQ9BYH1 1024 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.41□□□□□ -1.06
TDP1-209ENST00000554180 TMEM134Q9H6X4 195 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 POLD4Q9HCU8 107 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 PAK6Q9NQU5 681 aaPredicted RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 SUCLA2Q9P2R7 463 aaPredicted RBP8.41□□□□□ -1.06
TDP1-209ENST00000554180 TBX20Q9UMR3 447 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 SCN10AQ9Y5Y9 1956 aa8.41□□□□□ -1.06
TDP1-209ENST00000554180 C17orf102A2RUQ5 167 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 LRRC10BA6NIK2 292 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 LRRIQ4A6NIV6 560 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 CETN3O15182 167 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 SLC16A3O15427 465 aaKnown RBP8.4□□□□□ -1.06
TDP1-209ENST00000554180 CBFA2T2O43439 604 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 PIGRP01833 764 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 NR3C1P04150 777 aa8.4□□□□□ -1.06
TDP1-209ENST00000554180 ASGR1P07306 291 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms