RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 PPA1Q15181 289 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 SF3B4Q15427 424 aaKnown RBP eCLIP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 PPP1R7Q15435 360 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 ELF2Q15723 593 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CCDC153Q494R4 210 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 LRRC23Q53EV4 343 aaPredicted RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 LDHDQ86WU2 507 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 ZDHHC17Q8IUH5 632 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 KIRREL3Q8IZU9 778 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CPXCR1Q8N123 301 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 TOR1AIP2Q8NFQ8 470 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 EXD1Q8NHP7 514 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 DENND1AQ8TEH3 1009 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 AKT1S1Q96B36 256 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 TOE1Q96GM8 510 aaKnown RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 VCPIP1Q96JH7 1222 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 FERD3LQ96RJ6 166 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 KLHL4Q9C0H6 718 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 INTS2Q9H0H0 1204 aaKnown RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 ALG2Q9H553 416 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 TUT1Q9H6E5 874 aaKnown RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 SPON1Q9HCB6 807 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 MTUS1Q9ULD2 1270 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 ZMYND8Q9ULU4 1186 aaPredicted RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 EDARQ9UNE0 448 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 C15orf41Q9Y2V0 281 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 PLEKHG1Q9ULL1 1385 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 A8MVJ9 347 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 PALMO75781 387 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 HOXB3P14651 431 aaPredicted RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 SCNN1AP37088 669 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 MLH1P40692 756 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 PDE6CP51160 858 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CLCN6P51797 869 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 PRKCZQ05513 592 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CEP55Q53EZ4 464 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 AADACL4Q5VUY2 407 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 FAM109BQ6ICB4 259 aaPredicted RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 ENOSF1Q7L5Y1 443 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 NLRP8Q86W28 1048 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 APLFQ8IW19 511 aaPredicted RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CDH26Q8IXH8 852 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 ABHD8Q96I13 439 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 TTC25Q96NG3 672 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 SLC2A13Q96QE2 648 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CAMKK2Q96RR4 588 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 NUP58Q9BVL2 599 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 APOL5Q9BWW9 433 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 PITHD1Q9GZP4 211 aaPredicted RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 VPS11Q9H270 941 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 TM9SF3Q9HD45 589 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 DDX4Q9NQI0 724 aaKnown RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 NDUFA13Q9P0J0 144 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 VPS18Q9P253 973 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 DDX19BQ9UMR2 479 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CHMP3Q9Y3E7 222 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.22□□□□□ -1.73
LRFN5-204ENST00000554171 CCDC88BA6NC98 1476 aa4.22□□□□□ -1.73
LRFN5-204ENST00000554171 EYA4O95677 639 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 BAG2O95816 211 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 NPPAP01160 153 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 EIF2S1P05198 315 aaKnown RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 KRT18P05783 430 aaKnown RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 POTEJP0CG39 1038 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 GRK2P25098 689 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 TARSP26639 723 aaKnown RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 IL6STP40189 918 aaPredicted RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 SERPINB4P48594 390 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 STARD6P59095 220 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 ENPEPQ07075 957 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 KCNAB2Q13303 367 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 FASTKD5Q7L8L6 764 aaKnown RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 GPIHBP1Q8IV16 184 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 ALDH16A1Q8IZ83 802 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 GLIS1Q8NBF1 620 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 FBXO15Q8NCQ5 510 aaPredicted RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 SMC1BQ8NDV3 1235 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 GRAMD1AQ96CP6 724 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 L3MBTL3Q96JM7 780 aaPredicted RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 GAL3ST1Q99999 423 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 BCL7BQ9BQE9 202 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 PDE11AQ9HCR9 933 aa4.21□□□□□ -1.73
LRFN5-204ENST00000554171 ABI2Q9NYB9 513 aaPredicted RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 CHORDC1Q9UHD1 332 aaPredicted RBP4.21□□□□□ -1.73
LRFN5-204ENST00000554171 KTN1Q86UP2 1357 aaKnown RBP4.21□□□□□ -1.74
LRFN5-204ENST00000554171 CLASP1Q7Z460 1538 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 CCDC78A2IDD5 438 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 AP5Z1O43299 807 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 KLF4O43474 513 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 AKAP10O43572 662 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 OXSR1O95747 527 aaPredicted RBP4.21□□□□□ -1.74
LRFN5-204ENST00000554171 DDX58O95786 925 aaKnown RBP4.21□□□□□ -1.74
LRFN5-204ENST00000554171 EOMESO95936 686 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 POTEIP0CG38 1075 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 CHRNB1P11230 501 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 VAV1P15498 845 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 PCSK2P16519 638 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 CLCN5P51795 746 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 SLC14A1Q13336 389 aa4.21□□□□□ -1.74
LRFN5-204ENST00000554171 SQSTM1Q13501 440 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms