RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 PSAPP07602 524 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 EPCAMP16422 314 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 HSPA4P34932 840 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 BCAR1P56945 870 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 B3GNT9Q6UX72 402 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 SLC22A17Q8WUG5 538 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 ZBP1Q9H171 429 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 GLT8D2Q9H1C3 349 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 SORCS3Q9UPU3 1222 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 AKT3Q9Y243 479 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 NID2Q14112 1375 aa13.06□□□□□ -0.32
TUBB3-204ENST00000554116 IGKV6-21A0A0C4DH24 114 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 HOXA2O43364 376 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 CXCL14O95715 111 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 EOMESO95936 686 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 OATP04181 439 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 PPM1AP35813 382 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 NBL1P41271 181 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
TUBB3-204ENST00000554116 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
TUBB3-204ENST00000554116 RCAN1P53805 252 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 FGD1P98174 961 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 PRKCEQ02156 737 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 SMC1AQ14683 1233 aaKnown RBP13.05□□□□□ -0.32
TUBB3-204ENST00000554116 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 CASP10Q92851 521 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 LPPQ93052 612 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 JAKMIP1Q96N16 626 aaKnown RBP13.05□□□□□ -0.32
TUBB3-204ENST00000554116 SH2D3AQ9BRG2 576 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 UNC45AQ9H3U1 944 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 TSHZ2Q9NRE2 1034 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 DISC1Q9NRI5 854 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
TUBB3-204ENST00000554116 PRPF3O43395 683 aaKnown RBP13.04□□□□□ -0.32
TUBB3-204ENST00000554116 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-204ENST00000554116 PHKA2P46019 1235 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 SETQ01105 290 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-204ENST00000554116 KRT17Q04695 432 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 ITIH3Q06033 890 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 MTMR3Q13615 1198 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 RARS2Q5T160 578 aaKnown RBP13.04□□□□□ -0.32
TUBB3-204ENST00000554116 MCTP2Q6DN12 878 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 BLOC1S2Q6QNY1 142 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 ZDHHC14Q8IZN3 488 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 VPS52Q8N1B4 723 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 REXO1Q8N1G1 1221 aaKnown RBP13.04□□□□□ -0.32
TUBB3-204ENST00000554116 SLC5A5Q92911 643 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 PHKBQ93100 1093 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 TRAIPQ9BWF2 469 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 NRDE2Q9H7Z3 1164 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 DNAJB4Q9UDY4 337 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 NAP1L2Q9ULW6 460 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-204ENST00000554116 CEP131Q9UPN4 1083 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
TUBB3-204ENST00000554116 DOCK8Q8NF50 2099 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 WDR64B1ANS9 1081 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 EPB41L2O43491 1005 aaKnown RBP13.03□□□□□ -0.32
TUBB3-204ENST00000554116 LILRB3O75022 631 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 PSMD10O75832 226 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 GALTP07902 379 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 CTSAP10619 480 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 NPR3P17342 541 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 PSMA5P28066 241 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 CWF19L1Q69YN2 538 aaKnown RBP13.03□□□□□ -0.32
TUBB3-204ENST00000554116 KIAA1841Q6NSI8 718 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 Q6ZUG5 572 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 IGSF21Q96ID5 467 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 FAM167AQ96KS9 214 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 NECTIN4Q96NY8 510 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 NIFKQ9BYG3 293 aaKnown RBP13.03□□□□□ -0.32
TUBB3-204ENST00000554116 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 TBC1D13Q9NVG8 400 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 CEP250Q9BV73 2442 aa13.03□□□□□ -0.32
TUBB3-204ENST00000554116 A0A087WZ62 844 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 PI15O43692 258 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 ZNF623O75123 536 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 OFD1O75665 1012 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 RPS6KB1P23443 525 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 TMOD1P28289 359 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 MTHFRP42898 656 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 ID4P47928 161 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 NPY5RQ15761 445 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 CES5AQ6NT32 575 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
TUBB3-204ENST00000554116 ZNF280BQ86YH2 543 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 BRF1Q92994 677 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 NKD2Q969F2 451 aaPredicted RBP13.02□□□□□ -0.33
TUBB3-204ENST00000554116 RIT2Q99578 217 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 FDXACB1Q9BRP7 624 aaPredicted RBP13.02□□□□□ -0.33
TUBB3-204ENST00000554116 C6orf50Q9HD87 102 aa13.02□□□□□ -0.33
TUBB3-204ENST00000554116 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms