RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 MOXD2PA6NHM9 499 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 KBTBD13C9JR72 458 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 HAS3O00219 553 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 CALUO43852 315 aaPredicted RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 NMT1P30419 496 aaKnown RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 ARL2P36404 184 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 NPTX2P47972 431 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 STRN3Q13033 797 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 KNOP1Q1ED39 458 aaKnown RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 CENPPQ6IPU0 288 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 FBXO46Q6PJ61 603 aaPredicted RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 MTHFD1LQ6UB35 978 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 CXCL17Q6UXB2 119 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 HS2ST1Q7LGA3 356 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 HAUS6Q7Z4H7 955 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 FAM114A1Q8IWE2 563 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 ZBTB8OSQ8IWT0 167 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 DHX40Q8IX18 779 aaKnown RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 NELFCDQ8IXH7 590 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 KLHDC9Q8NEP7 349 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 ZNF507Q8TCN5 953 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 TRAPPC12Q8WVT3 735 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 KAT2BQ92831 832 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 HVCN1Q96D96 273 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 CEP89Q96ST8 783 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 ST6GALNAC4Q9H4F1 302 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 XPNPEP1Q9NQW7 623 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 MAGEC2Q9UBF1 373 aaPredicted RBP11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 NFE2L3Q9Y4A8 694 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 CASP8AP2Q9UKL3 1982 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
TMEM55B-205ENST00000554028 MYADML2A6NDP7 307 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 LRRIQ4A6NIV6 560 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 ZBTB42B2RXF5 422 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 K7ERI5 159 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 PDXKO00764 312 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 SLC16A4O15374 487 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 PRPF6O94906 941 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 C22orf31O95567 290 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 RPLP2P05387 115 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 ASGR1P07306 291 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 TPM2P07951 284 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 HSPA1AP0DMV8 641 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 HSPA1BP0DMV9 641 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 MYBP10242 640 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 RPL13P26373 211 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 EFNA5P52803 228 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 LBX1P52954 281 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 NCKAP1LP55160 1127 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 SNRPFP62306 86 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 HSP90AA2PQ14568 343 aaPredicted RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 BMT2Q1RMZ1 405 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 FAM47CQ5HY64 1035 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 NFRKBQ6P4R8 1299 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 EPM2AIP1Q7L775 607 aaPredicted RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 RHPN2Q8IUC4 686 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 LRRC71Q8N4P6 559 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 CSGALNACT2Q8N6G5 542 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 SCFD1Q8WVM8 642 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 PRPF31Q8WWY3 499 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 GLT1D1Q96MS3 346 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 RNF208Q9H0X6 261 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 C2orf40Q9H1Z8 148 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 CGNQ9P2M7 1197 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 AKT3Q9Y243 479 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 ZSWIM8A7E2V4 1837 aa11.51□□□□□ -0.57
TMEM55B-205ENST00000554028 DENND3A2RUS2 1198 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 GLRA2P23416 452 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 PHKA2P46019 1235 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 ACLYP53396 1101 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 SOX10P56693 466 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 GTF2BQ00403 316 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 FKBP3Q00688 224 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 SPAG1Q07617 926 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 LAMTOR4Q0VGL1 99 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 COL13A1Q5TAT6 717 aaPredicted RBP11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 ANKRD40Q6AI12 368 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 RSPH3Q86UC2 560 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 CREBRFQ8IUR6 639 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 NME8Q8N427 588 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 SCLT1Q96NL6 688 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 SRRTQ9BXP5 876 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 GBP3Q9H0R5 595 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 SEMA6BQ9H3T3 888 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 TYW1Q9NV66 732 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 FANCLQ9NW38 375 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 HDAC6Q9UBN7 1215 aa11.5□□□□□ -0.57
TMEM55B-205ENST00000554028 LOXHD1Q8IVV2 1947 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 SMIM35A0A1B0GVV1 85 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 CETN3O15182 167 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 GNA14O95837 355 aa11.49□□□□□ -0.57
TMEM55B-205ENST00000554028 SERPINC1P01008 464 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms