RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FAM153BP0C7A2 387 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 RGS3P49796 1198 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 TMEM132BQ14DG7 1078 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 DGKDQ16760 1214 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 HECTD2Q5U5R9 776 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 MFSD5Q6N075 450 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 CC2D1AQ6P1N0 951 aaPredicted RBP3.77□□□□□ -1.81
SRP54-204ENST00000553923 OTOP1Q7RTM1 612 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 SYNE4Q8N205 404 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 BEND2Q8NDZ0 799 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 OR5AN1Q8NGI8 311 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 CDC6Q99741 560 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 DHRS4Q9BTZ2 278 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 ZNF768Q9H5H4 540 aaKnown RBP3.77□□□□□ -1.81
SRP54-204ENST00000553923 SLC52A2Q9HAB3 445 aa3.77□□□□□ -1.81
SRP54-204ENST00000553923 ADARB2Q9NS39 739 aaKnown RBP3.77□□□□□ -1.81
SRP54-204ENST00000553923 A0A0A6YYK5 440 aaPredicted RBP3.76□□□□□ -1.81
SRP54-204ENST00000553923 GOLGA8BA8MQT2 603 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 AHRRA9YTQ3 701 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 KIAA0355O15063 1070 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 PDPK1O15530 556 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 DIAPH1O60610 1272 aaKnown RBP3.76□□□□□ -1.81
SRP54-204ENST00000553923 STC2O76061 302 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 TAP1Q03518 808 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 RASGRF1Q13972 1273 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 PLEKHG4Q58EX7 1191 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 DCAF17Q5H9S7 520 aaPredicted RBP3.76□□□□□ -1.81
SRP54-204ENST00000553923 NBPF6Q5VWK0 638 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 ABHD17CQ6PCB6 329 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 LRP10Q7Z4F1 713 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 MB21D1Q8N884 522 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 SCLYQ96I15 445 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 NBPF4Q96M43 638 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 ENKD1Q9H0I2 346 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 R3HDMLQ9H3Y0 253 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 DKK2Q9UBU2 259 aa3.76□□□□□ -1.81
SRP54-204ENST00000553923 MRPS23Q9Y3D9 190 aaKnown RBP3.76□□□□□ -1.81
SRP54-204ENST00000553923 CENPVL1A0A0U1RR11 272 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 DVL2O14641 736 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 IPO13O94829 963 aaKnown RBP3.75□□□□□ -1.81
SRP54-204ENST00000553923 JUNP05412 331 aaKnown RBP3.75□□□□□ -1.81
SRP54-204ENST00000553923 FNTBP49356 437 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 SLC6A3Q01959 620 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 SPIDRQ14159 915 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 TRIM61Q5EBN2 209 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 PAPD7Q5XG87 772 aaKnown RBP3.75□□□□□ -1.81
SRP54-204ENST00000553923 KCNV1Q6PIU1 500 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 Q6YL49 198 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 CMTM4Q8IZR5 234 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 SLC7A14Q8TBB6 771 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 ST8SIA2Q92186 375 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 ERCC4Q92889 916 aaPredicted RBP3.75□□□□□ -1.81
SRP54-204ENST00000553923 MAML3Q96JK9 1138 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 CCDC113Q9H0I3 377 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 ALG13Q9NP73 1137 aaKnown RBP3.75□□□□□ -1.81
SRP54-204ENST00000553923 SYBUQ9NX95 663 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 RCAN3Q9UKA8 241 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 SORCS3Q9UPU3 1222 aa3.75□□□□□ -1.81
SRP54-204ENST00000553923 TMEM200CA6NKL6 621 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 TRIM24O15164 1050 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 ZNF185O15231 689 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 PPFIA4O75335 1185 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 CD38P28907 300 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 ZEB1P37275 1124 aaPredicted RBP3.74□□□□□ -1.81
SRP54-204ENST00000553923 KIR2DL3P43628 341 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 MECP2P51608 486 aaKnown RBP3.74□□□□□ -1.81
SRP54-204ENST00000553923 FAM189BP81408 668 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 IRF9Q00978 393 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 LONRF2Q1L5Z9 754 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 STRIP1Q5VSL9 837 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 APBB1IPQ7Z5R6 666 aaPredicted RBP3.74□□□□□ -1.81
SRP54-204ENST00000553923 BMP8AQ7Z5Y6 402 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 FAM98AQ8NCA5 519 aaKnown RBP3.74□□□□□ -1.81
SRP54-204ENST00000553923 MYEOVQ96EZ4 313 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 C16orf92Q96LL3 132 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 WDR92Q96MX6 357 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 KCMF1Q9P0J7 381 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 PFDN2Q9UHV9 154 aa3.74□□□□□ -1.81
SRP54-204ENST00000553923 MTSS1O43312 755 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 LPXNO60711 386 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 EFCAB14O75071 495 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 HIP1RO75146 1068 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 NPTXRO95502 500 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 HNRNPLP14866 589 aaKnown RBP eCLIP3.73□□□□□ -1.81
SRP54-204ENST00000553923 TYRP1P17643 537 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 LAG3P18627 525 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 HK1P19367 917 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 ROM1Q03395 351 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 SSRP1Q08945 709 aaKnown RBP3.73□□□□□ -1.81
SRP54-204ENST00000553923 TIGD2Q4W5G0 525 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 TMEM177Q53S58 311 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 METTL24Q5JXM2 366 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 LILRA3Q8N6C8 439 aaPredicted RBP3.73□□□□□ -1.81
SRP54-204ENST00000553923 CPT1CQ8TCG5 803 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 DYDC2Q96IM9 177 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 IPO9Q96P70 1041 aaKnown RBP3.73□□□□□ -1.81
SRP54-204ENST00000553923 KCNH6Q9H252 994 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 SERHL2Q9H4I8 314 aa3.73□□□□□ -1.81
SRP54-204ENST00000553923 POLR3BQ9NW08 1133 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms