RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CORO7P57737 925 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 SYCE1Q8N0S2 351 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 DAW1Q8N136 415 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 CTNNBL1Q8WYA6 563 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 THAP2Q9H0W7 228 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 DPH5Q9H2P9 285 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 AMFRQ9UKV5 643 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 A0A0A6YYK5 440 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 EBAG9O00559 213 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 NR1D1P20393 614 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 LMNB1P20700 586 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 ANXA13P27216 316 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 HSPA9P38646 679 aaKnown RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 SKOR1P84550 965 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 BFSP1Q12934 665 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 LDHDQ86WU2 507 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 HES6Q96HZ4 224 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 CALR3Q96L12 384 aaKnown RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 MKNK1Q9BUB5 465 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 CHORDC1Q9UHD1 332 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 ZBTB12Q9Y330 459 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 MYH11P35749 1972 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 FOXN3O00409 490 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 NDUFAB1O14561 156 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 C21orf2O43822 256 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 ITGB5P18084 799 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 ZNF211Q13398 564 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 UAP1Q16222 522 aaPredicted RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 GRIPAP1Q4V328 841 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 STXBP4Q6ZWJ1 553 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 RFFLQ8WZ73 363 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 AGBL1Q96MI9 1066 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 TEKT3Q9BXF9 490 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 WDR11Q9BZH6 1224 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 RANBP17Q9H2T7 1088 aaKnown RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 DMAC2Q9NW81 257 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 SEL1LQ9UBV2 794 aa15.81■□□□□ 0.12
ACTN1-211ENST00000553882 MRPL11Q9Y3B7 192 aaKnown RBP15.81■□□□□ 0.12
ACTN1-211ENST00000553882 CTNNA1P35221 906 aaKnown RBP15.8■□□□□ 0.12
ACTN1-211ENST00000553882 MAPK7Q13164 816 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 CUL1Q13616 776 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 DCAF12L1Q5VU92 463 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 PADI6Q6TGC4 694 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 ZSWIM2Q8NEG5 633 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 CHURC1Q8WUH1 139 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 SLC20A1Q8WUM9 679 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 UBLCP1Q8WVY7 318 aaPredicted RBP15.8■□□□□ 0.12
ACTN1-211ENST00000553882 ATP6V1G3Q96LB4 118 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 INTUQ9ULD6 942 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 TMEM150BA6NC51 233 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 STYK1Q6J9G0 422 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 IL31RAQ8NI17 732 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 TRIM51Q9BSJ1 452 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 ODF2LQ9ULJ1 636 aa15.8■□□□□ 0.12
ACTN1-211ENST00000553882 GOLGA6L10A6NI86 522 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 CCDC188H7C350 402 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 TMEM253P0C7T8 217 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 MAGEA9P43362 315 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 NFIL3Q16649 462 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 RASGEF1CQ8N431 466 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 KCTD17Q8N5Z5 321 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 CBWD1Q9BRT8 395 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 VCPKMTQ9H867 229 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 UBE2TQ9NPD8 197 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-211ENST00000553882 TMOD4Q9NZQ9 345 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 BCCIPQ9P287 314 aaKnown RBP eCLIP15.79■□□□□ 0.12
ACTN1-211ENST00000553882 COG5Q9UP83 839 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 EMSYQ7Z589 1322 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 ZNF646O15015 1829 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-211ENST00000553882 LSP1P33241 339 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 USP8P40818 1118 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 GCLMP48507 274 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 TRAF1Q13077 416 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 ZNF746Q6NUN9 644 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-211ENST00000553882 KDM7AQ6ZMT4 941 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 SYT11Q9BT88 431 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 EHMT1Q9H9B1 1298 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 KCNH7Q9NS40 1196 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 HOMER2Q9NSB8 354 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 COL20A1Q9P218 1284 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 ZNF70Q9UC06 446 aaPredicted RBP15.79■□□□□ 0.12
ACTN1-211ENST00000553882 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
ACTN1-211ENST00000553882 NFIBO00712 420 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 NPEPPSP55786 919 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 SETQ01105 290 aaPredicted RBP15.78■□□□□ 0.12
ACTN1-211ENST00000553882 PPP2R5AQ15172 486 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 DLGAP5Q15398 846 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 AADACL2Q6P093 401 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 MIER3Q7Z3K6 550 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 CD302Q8IX05 232 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 C7orf43Q8WVR3 580 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 FAM107BQ9H098 131 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 RBBP6Q7Z6E9 1792 aaKnown RBP15.78■□□□□ 0.12
ACTN1-211ENST00000553882 PPP1R37O75864 691 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 MYZAPP0CAP1 466 aa15.78■□□□□ 0.12
ACTN1-211ENST00000553882 GUCY2CP25092 1073 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms