RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD8-206ENST00000553870 C1orf186Q6ZWK4 172 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 SLC24A5Q71RS6 500 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 RTN4RL1Q86UN2 441 aaPredicted RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 MYOCDQ8IZQ8 938 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 RNF149Q8NC42 400 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 TIFAQ96CG3 184 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 LRCH3Q96II8 777 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 NLRP4Q96MN2 994 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 PNMA5Q96PV4 448 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 ADAM2Q99965 735 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 TRAIPQ9BWF2 469 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 CSRNP2Q9H175 543 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 TMX1Q9H3N1 280 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 ELAC1Q9H777 363 aaKnown RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 SLC28A3Q9HAS3 691 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 DACT1Q9NYF0 836 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 TFIP11Q9UBB9 837 aaKnown RBP10.36□□□□□ -0.75
CHD8-206ENST00000553870 RCOR1Q9UKL0 485 aa10.36□□□□□ -0.75
CHD8-206ENST00000553870 DENND3A2RUS2 1198 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 TLL1O43897 1013 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 EOMESO95936 686 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 PLA2G4BP0C869 781 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 SKIP12755 728 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 GLRA2P23416 452 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 GUCY2CP25092 1073 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 AXLP30530 894 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 HTRA4P83105 476 aaPredicted RBP10.35□□□□□ -0.75
CHD8-206ENST00000553870 PKP1Q13835 747 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 DSC3Q14574 896 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 ZRSR1Q15695 479 aaKnown RBP10.35□□□□□ -0.75
CHD8-206ENST00000553870 FAM102BQ5T8I3 360 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 RINT1Q6NUQ1 792 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 CATSPER4Q7RTX7 472 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 NPAS4Q8IUM7 802 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 KSR1Q8IVT5 923 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 CRIPAKQ8N1N5 446 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 RASSF8Q8NHQ8 419 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 RSPH1Q8WYR4 309 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 IFT74Q96LB3 600 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 DRC1Q96MC2 740 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 PPP1R16BQ96T49 567 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 POLR3FQ9H1D9 316 aaPredicted RBP10.35□□□□□ -0.75
CHD8-206ENST00000553870 C2orf40Q9H1Z8 148 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 ZDHHC9Q9Y397 364 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 PCDHB7Q9Y5E2 793 aa10.35□□□□□ -0.75
CHD8-206ENST00000553870 PHLPP2Q6ZVD8 1323 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 A0A0U1RQF3 1178 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 C9IYK1 514 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 HOXA2O43364 376 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 CUTAO60888 179 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 ZNF623O75123 536 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 SCP2P22307 547 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 PBX2P40425 430 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 NAMPTP43490 491 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 SARSP49591 514 aaKnown RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 RAB27AP51159 221 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 EFNA5P52803 228 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 RABGGTBP53611 331 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 SLC12A3P55017 1021 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 KRT85P78386 507 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 DNM1Q05193 864 aaKnown RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 GRIN1Q05586 938 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 CAPSQ13938 189 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 FOXD4L5Q5VV16 416 aaPredicted RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 RRAGBQ5VZM2 374 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 CCDC73Q6ZRK6 1079 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 KCNK18Q7Z418 384 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 FOXD4L4Q8WXT5 416 aaPredicted RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 RAD54LQ92698 747 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 SYMPKQ92797 1274 aaKnown RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 CCDC51Q96ER9 411 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 EPSTI1Q96J88 318 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 PRIMPOLQ96LW4 560 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 NTPCRQ9BSD7 190 aaKnown RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 SEMA6BQ9H3T3 888 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 ZNF576Q9H609 170 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 BMP2KQ9NSY1 1161 aaPredicted RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 TMEM161AQ9NX61 479 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 STK17AQ9UEE5 414 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 LRFN2Q9ULH4 789 aa10.34□□□□□ -0.75
CHD8-206ENST00000553870 RBM19Q9Y4C8 960 aaKnown RBP10.34□□□□□ -0.75
CHD8-206ENST00000553870 TTC3P53804 2025 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 DGKIO75912 1065 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 ERLIN2O94905 339 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 PLCG1P19174 1290 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 ANP32AP39687 249 aaKnown RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 KARSQ15046 597 aaKnown RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 FAM187BQ17R55 369 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 CDCA2Q69YH5 1023 aaPredicted RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 MAEAQ7L5Y9 396 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 ZBTB8OSQ8IWT0 167 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 DEFB123Q8N688 67 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 CNNM3Q8NE01 707 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 LARP4BQ92615 738 aaKnown RBP10.33□□□□□ -0.76
CHD8-206ENST00000553870 KCNN1Q92952 543 aa10.33□□□□□ -0.76
CHD8-206ENST00000553870 ZNF689Q96CS4 500 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms