RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 ATP2A1O14983 1001 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 RNF113AO15541 343 aaKnown RBP8.28□□□□□ -1.08
PRKCH-205ENST00000553726 ZBED4O75132 1171 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 SLC3A2P08195 630 aaKnown RBP8.28□□□□□ -1.08
PRKCH-205ENST00000553726 ITIH2P19823 946 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 ADCYAP1R1P41586 468 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 FGD1P98174 961 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 PTPN11Q06124 597 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-205ENST00000553726 KLRC3Q07444 240 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 PRAMEF19Q5SWL8 479 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 FAM83BQ5T0W9 1011 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 TTBK2Q6IQ55 1244 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 HDXQ7Z353 690 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 NUP133Q8WUM0 1156 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 MKL1Q969V6 931 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 SLF1Q9BQI6 1058 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 NACAP1Q9BZK3 213 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 FBXO40Q9UH90 709 aa8.28□□□□□ -1.08
PRKCH-205ENST00000553726 GREB1LQ9C091 1923 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-205ENST00000553726 MYH4Q9Y623 1939 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 LTBP2Q14767 1821 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 ROBO3Q96MS0 1386 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 ERC2O15083 957 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 CD96P40200 585 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 OAZ1P54368 228 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 PDE4BQ07343 736 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 TRIM60Q495X7 471 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 FAM47AQ5JRC9 791 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 ANO1Q5XXA6 986 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 SNRNP48Q6IEG0 339 aaKnown RBP8.27□□□□□ -1.09
PRKCH-205ENST00000553726 MAMDC4Q6UXC1 1216 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 Q7L0L9 218 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 CYFIP1Q7L576 1253 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 REPS2Q8NFH8 660 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 TOX2Q96NM4 488 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 SPC25Q9HBM1 224 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 FBXO28Q9NVF7 368 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 CLIP2Q9UDT6 1046 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 FEM1BQ9UK73 627 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 FAM184BQ9ULE4 1060 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 AK5Q9Y6K8 562 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 TTC41PQ6P2S7 1318 aa8.27□□□□□ -1.09
PRKCH-205ENST00000553726 COL6A3P12111 3177 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 DNAJC25-GNG10A0A024R161 153 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PRAMEF27A3QJZ7 478 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 BIN1O00499 593 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 GPAA1O43292 621 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 SMARCA5O60264 1052 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 DUSP11O75319 330 aaKnown RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 LRIG2O94898 1065 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PAPLNO95428 1278 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 TTLL1O95922 423 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 EOMESO95936 686 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 APPP05067 770 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PGK2P07205 417 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 CLTBP09497 229 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 ZNF865P0CJ78 1059 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 TDO2P48775 406 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 SMAD3P84022 425 aaKnown RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 TLE2Q04725 743 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 ARMCX6Q7L4S7 300 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 IFNL3Q8IZI9 196 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PCSK9Q8NBP7 692 aaKnown RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 GMCL1P1Q8NEA9 526 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 CHST13Q8NET6 341 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PI4K2BQ8TCG2 481 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 CHURC1Q8WUH1 139 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 BADQ92934 168 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 OSBP2Q969R2 916 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 GAL3ST3Q96A11 431 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 FERMT2Q96AC1 680 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PLPPR2Q96GM1 343 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 ABHD16BQ9H3Z7 469 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PRDM5Q9NQX1 630 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 PDLIM7Q9NR12 457 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 MBNL3Q9NUK0 354 aaKnown RBP8.26□□□□□ -1.09
PRKCH-205ENST00000553726 MTMR4Q9NYA4 1195 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 MROH7Q68CQ1 1323 aa8.26□□□□□ -1.09
PRKCH-205ENST00000553726 IGKV6D-41A0A0C4DH26 115 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 A0A1W2PQ45 241 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-205ENST00000553726 A0A1W2PQY0 241 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 SMIM22K7EJ46 135 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 KIAA0355O15063 1070 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 NDUFB10O96000 172 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 PGK1P00558 417 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 CHGBP05060 677 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
PRKCH-205ENST00000553726 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 RAG1P15918 1043 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 ACLYP53396 1101 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 RPS26P62854 115 aaKnown RBP8.25□□□□□ -1.09
PRKCH-205ENST00000553726 SHHQ15465 462 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 CCDC85BQ15834 202 aaPredicted RBP8.25□□□□□ -1.09
PRKCH-205ENST00000553726 CCDC174Q6PII3 467 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 SND1Q7KZF4 910 aaKnown RBP eCLIP8.25□□□□□ -1.09
PRKCH-205ENST00000553726 ANKRD33Q7Z3H0 272 aa8.25□□□□□ -1.09
PRKCH-205ENST00000553726 FAM160B2Q86V87 743 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms