RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 CLEC14AQ86T13 490 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 C1orf210Q8IVY1 113 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 ZFPM1Q8IX07 1006 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 NIM1KQ8IY84 436 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 THEMISQ8N1K5 641 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-210ENST00000553693 PPM1KQ8N3J5 372 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 EXTL1Q92935 676 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 FEZ1Q99689 392 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 PITHD1Q9GZP4 211 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-210ENST00000553693 MTG2Q9H4K7 406 aa5.83□□□□□ -1.48
SCFD1-210ENST00000553693 AGO3Q9H9G7 860 aaKnown RBP5.83□□□□□ -1.48
SCFD1-210ENST00000553693 C2orf78A6NCI8 922 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 PRPF6O94906 941 aaKnown RBP5.82□□□□□ -1.48
SCFD1-210ENST00000553693 APOL3O95236 402 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 ANTXR2P58335 489 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 OCRLQ01968 901 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 DSG1Q02413 1049 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 SAFB2Q14151 953 aaKnown RBP eCLIP5.82□□□□□ -1.48
SCFD1-210ENST00000553693 LRRC32Q14392 662 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 KRT40Q6A162 431 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 AHI1Q8N157 1196 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 ANKRD53Q8N9V6 530 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 ZNF503Q96F45 646 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 MYL10Q9BUA6 226 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 POFUT1Q9H488 388 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 C14orf93Q9H972 538 aaKnown RBP5.82□□□□□ -1.48
SCFD1-210ENST00000553693 USP36Q9P275 1121 aaKnown RBP5.82□□□□□ -1.48
SCFD1-210ENST00000553693 DNAI1Q9UI46 699 aa5.82□□□□□ -1.48
SCFD1-210ENST00000553693 A0A0A6YYJ9 748 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 ZNF202O95125 648 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 JUNP05412 331 aaKnown RBP5.81□□□□□ -1.48
SCFD1-210ENST00000553693 VSIG10L2P0DP72 767 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 STAT3P40763 770 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 ABHD18Q0P651 414 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 CRHR2Q13324 411 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 SART3Q15020 963 aaKnown RBP5.81□□□□□ -1.48
SCFD1-210ENST00000553693 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 TKFCQ3LXA3 575 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 CNNM4Q6P4Q7 775 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 PLA2G15Q8NCC3 412 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 RTF1Q92541 710 aaKnown RBP5.81□□□□□ -1.48
SCFD1-210ENST00000553693 MFSD3Q96ES6 412 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 HIST1H2AHQ96KK5 128 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 RPL10LQ96L21 214 aaKnown RBP5.81□□□□□ -1.48
SCFD1-210ENST00000553693 HIST1H2AJQ99878 128 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 ZMAT4Q9H898 229 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.81□□□□□ -1.485e-6■■■□□ 17
SCFD1-210ENST00000553693 IL23AQ9NPF7 189 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 THG1LQ9NWX6 298 aaKnown RBP5.81□□□□□ -1.48
SCFD1-210ENST00000553693 H2AFY2Q9P0M6 372 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-210ENST00000553693 RCAN3Q9UKA8 241 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 HS3ST3A1Q9Y663 406 aa5.81□□□□□ -1.48
SCFD1-210ENST00000553693 ST20-MTHFSA0A0A6YYL1 179 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 ZNF891A8MT65 544 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-210ENST00000553693 NPIPB8E9PQR5 432 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 OPHN1O60890 802 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 TOX4O94842 621 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 KPNA1P52294 538 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-210ENST00000553693 GPR158Q5T848 1215 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 ESPNLQ6ZVH7 1005 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 GAREM2Q75VX8 874 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 IL17DQ8TAD2 202 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 CHTF18Q8WVB6 975 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 FERMT2Q96AC1 680 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 MIEF2Q96C03 454 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 PLEKHG4BQ96PX9 1271 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 GPHA2Q96T91 129 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 TCF25Q9BQ70 676 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 NOL10Q9BSC4 688 aaKnown RBP5.8□□□□□ -1.48
SCFD1-210ENST00000553693 OSBPL6Q9BZF3 934 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 SH3BP1Q9Y3L3 701 aa5.8□□□□□ -1.48
SCFD1-210ENST00000553693 MTSS1O43312 755 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 FSBPO95073 299 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 SCNN1BP51168 640 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 ADAM8P78325 824 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 SMAD3P84022 425 aaKnown RBP5.79□□□□□ -1.48
SCFD1-210ENST00000553693 LSM12Q3MHD2 195 aaKnown RBP5.79□□□□□ -1.48
SCFD1-210ENST00000553693 TAF7LQ5H9L4 462 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 MFSD5Q6N075 450 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 FAM111BQ6SJ93 734 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 DHX37Q8IY37 1157 aaKnown RBP5.79□□□□□ -1.48
SCFD1-210ENST00000553693 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 OR2W6PQ8NHA6 318 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 CACTINQ8WUQ7 758 aaKnown RBP5.79□□□□□ -1.48
SCFD1-210ENST00000553693 MTFR1LQ9H019 292 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 ZNF703Q9H7S9 590 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-210ENST00000553693 PARPBPQ9NWS1 579 aa5.79□□□□□ -1.48
SCFD1-210ENST00000553693 MRPL42Q9Y6G3 142 aaKnown RBP5.79□□□□□ -1.48
SCFD1-210ENST00000553693 UBE2QL1A1L167 161 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 NRP1O14786 923 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 C1SP09871 688 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 HNRNPLP14866 589 aaKnown RBP eCLIP5.78□□□□□ -1.484e-7■■■□□ 15
SCFD1-210ENST00000553693 MCM7P33993 719 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 PHC1P78364 1004 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 ELAVL1Q15717 326 aaKnown RBP5.78□□□□□ -1.48
SCFD1-210ENST00000553693 ZNF662Q6ZS27 426 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 C11orf74Q86VG3 221 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 JAZF1Q86VZ6 243 aa5.78□□□□□ -1.48
SCFD1-210ENST00000553693 SMC1BQ8NDV3 1235 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms