RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 MYL10Q9BUA6 226 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 KRTAP3-1Q9BYR8 98 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 KIAA1683Q9H0B3 1180 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 POFUT1Q9H488 388 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 MSRAQ9UJ68 235 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 ZFR2Q9UPR6 939 aaKnown RBP4.7□□□□□ -1.66
VRK1-202ENST00000553683 JAG2Q9Y219 1238 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 MYRFQ9Y2G1 1151 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 TSC22D4Q9Y3Q8 395 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 TCAF1Q9Y4C2 921 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 MYPNQ86TC9 1320 aa4.7□□□□□ -1.66
VRK1-202ENST00000553683 CDC14BO60729 498 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 IGSF3O75054 1194 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 RAB11FIP3O75154 756 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 PFKMP08237 780 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 ZNF20P17024 532 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 ANTXR2P58335 489 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 ICAM4Q14773 271 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 BROXQ5VW32 411 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 PLA2G15Q8NCC3 412 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 GCDHQ92947 438 aaPredicted RBP4.69□□□□□ -1.66
VRK1-202ENST00000553683 PAWRQ96IZ0 340 aaKnown RBP4.69□□□□□ -1.66
VRK1-202ENST00000553683 ACAP3Q96P50 834 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 LRRC37BQ96QE4 947 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 MPHOSPH9Q99550 1183 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 PTPN18Q99952 460 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 PCDHB6Q9Y5E3 794 aa4.69□□□□□ -1.66
VRK1-202ENST00000553683 ELL2O00472 640 aaPredicted RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 JUNP05412 331 aaKnown RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 COMTP21964 271 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 ADAM15Q13444 863 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 CT47A1Q5JQC4 288 aaPredicted RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 GJC2Q5T442 439 aaPredicted RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 CXorf67Q86X51 503 aaPredicted RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 UNC5BQ8IZJ1 945 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 FERMT2Q96AC1 680 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 FAM89AQ96GI7 184 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 C8orf49Q96NF6 230 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 NOL10Q9BSC4 688 aaKnown RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 PLA2G12BQ9BX93 195 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 KLC2Q9H0B6 622 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 DEF6Q9H4E7 631 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 C14orf93Q9H972 538 aaKnown RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 FAM184BQ9ULE4 1060 aa4.68□□□□□ -1.66
VRK1-202ENST00000553683 NOC2LQ9Y3T9 749 aaKnown RBP4.68□□□□□ -1.66
VRK1-202ENST00000553683 C2orf78A6NCI8 922 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 NEMP1O14524 444 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 FOXS1O43638 330 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 SEC24DO94855 1032 aaPredicted RBP4.67□□□□□ -1.66
VRK1-202ENST00000553683 APOL3O95236 402 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 EYA4O95677 639 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 VSIG10L2P0DP72 767 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 XPAP23025 273 aaPredicted RBP4.67□□□□□ -1.66
VRK1-202ENST00000553683 MANFP55145 182 aaKnown RBP4.67□□□□□ -1.66
VRK1-202ENST00000553683 NRG3P56975 720 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 R3HDM1Q15032 1099 aaKnown RBP4.67□□□□□ -1.66
VRK1-202ENST00000553683 MAMDC4Q6UXC1 1216 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 UNQ6494/PRO21346Q6UXR6 183 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 FUKQ8N0W3 1084 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 SHCBP1Q8NEM2 672 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 WWC2-AS2Q96NR7 200 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 GNRHR2Q96P88 292 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 GPR20Q99678 358 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 DPYSL5Q9BPU6 564 aa4.67□□□□□ -1.66
VRK1-202ENST00000553683 C12orf65Q9H3J6 166 aaKnown RBP4.67□□□□□ -1.66
VRK1-202ENST00000553683 AURKAIP1Q9NWT8 199 aaPredicted RBP4.67□□□□□ -1.66
VRK1-202ENST00000553683 A0A0A6YYK5 440 aaPredicted RBP4.66□□□□□ -1.66
VRK1-202ENST00000553683 K7ESF4 209 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 NRP1O14786 923 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 KDM1AO60341 852 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 KIR2DL3P43628 341 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 ADAM8P78325 824 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 MEF2AQ02078 507 aaPredicted RBP4.66□□□□□ -1.66
VRK1-202ENST00000553683 STRN3Q13033 797 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 TCIRG1Q13488 830 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 RIN1Q13671 783 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 RNF219Q5W0B1 726 aaPredicted RBP4.66□□□□□ -1.66
VRK1-202ENST00000553683 GPR135Q8IZ08 494 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 OR14K1Q8NGZ2 314 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 OR14C36Q8NHC7 312 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 GAB3Q8WWW8 586 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 SOX7Q9BT81 388 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 KRTAP9-3Q9BYQ3 159 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 PLA2G3Q9NZ20 509 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 TMPRSS11EQ9UL52 423 aa4.66□□□□□ -1.66
VRK1-202ENST00000553683 PRSS38A1L453 326 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 MUSKO15146 869 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 CYP27B1O15528 508 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 GAAP10253 952 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 WNT3AP56704 352 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 BPIFB4P59827 614 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 KRTAP10-2P60368 255 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 ATP2C1P98194 919 aaPredicted RBP4.65□□□□□ -1.67
VRK1-202ENST00000553683 HHEXQ03014 270 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 GRM7Q14831 915 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 PRKD1Q15139 912 aaPredicted RBP4.65□□□□□ -1.67
VRK1-202ENST00000553683 FSCN1Q16658 493 aaKnown RBP4.65□□□□□ -1.67
VRK1-202ENST00000553683 ZXDCQ2QGD7 858 aaPredicted RBP4.65□□□□□ -1.67
VRK1-202ENST00000553683 ZBTB41Q5SVQ8 909 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms