RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 SUPT20HL2P0C7V6 817 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ALAS1P13196 640 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ATP5JP18859 108 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TDO2P48775 406 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RRP1P56182 461 aaKnown RBP6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CHMP4BP1P59074 171 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 DMWDQ09019 674 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 DPYDQ12882 1025 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GPM6BQ13491 265 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 UBE3CQ15386 1083 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ANGPT1Q15389 498 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TMEM63BQ5T3F8 832 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SLFN13Q68D06 897 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZSCAN25Q6NSZ9 544 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FAM117BQ6P1L5 589 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LURAP1LQ8IV03 231 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MAP4K3Q8IVH8 894 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZNF444Q8N0Y2 327 aaPredicted RBP6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CHST13Q8NET6 341 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PPP1R13LQ8WUF5 828 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RUBCNQ92622 972 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CEP95Q96GE4 821 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RPGRIP1Q96KN7 1286 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 HAUS7Q99871 368 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ACAD9Q9H845 621 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RNF146Q9NTX7 359 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CLEC1BQ9P126 229 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NYAP2Q9P242 653 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FEM1BQ9UK73 627 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MTMR7Q9Y216 660 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 Q9Y3F1 56 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 R4GN57 208 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PTPRSQ13332 1948 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TANC1Q9C0D5 1861 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 OTOGLQ3ZCN5 2332 aa6.58□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZZEF1O43149 2961 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PARP14Q460N5 1801 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ASB14A6NK59 587 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GSG1L2A8MUP6 293 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CCER2I3L3R5 266 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LINC01387J3KSC0 135 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ATP2A1O14983 1001 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SMARCA5O60264 1052 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TTLL1O95922 423 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CXCL10P02778 98 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MYL3P08590 195 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 BMP3P12645 472 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 GRIK1P39086 918 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SLC1A4P43007 532 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 HTRA4P83105 476 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 HNRNPUQ00839 825 aaKnown RBP eCLIP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RBL2Q08999 1139 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ADAM15Q13444 863 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LRRFIP1Q32MZ4 808 aaKnown RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FAM47CQ5HY64 1035 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TMCO4Q5TGY1 634 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TSHZ3Q63HK5 1081 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CWF19L1Q69YN2 538 aaKnown RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 NSMFQ6X4W1 530 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 KIAA1211Q6ZU35 1233 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ANKMY2Q8IV38 441 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CCDC105Q8IYK2 499 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 FAM133AQ8N9E0 248 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SMRP1Q8NCR6 262 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 STRBPQ96SI9 672 aaKnown RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 HINFPQ9BQA5 517 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TRAIPQ9BWF2 469 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PHF7Q9BWX1 381 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 A1CFQ9NQ94 594 aaKnown RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 INCENPQ9NQS7 918 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZMIZ1Q9ULJ6 1067 aa6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 USP15Q9Y4E8 981 aaPredicted RBP6.57□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SIP14410 1827 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PI15O43692 258 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 RAB11FIP3O75154 756 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 XYLBO75191 536 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TSPY3P0CV98 308 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 TSPY8P0CW00 308 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SDHBP21912 280 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MCCP23508 829 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CLCN5P51795 746 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 STAT2P52630 851 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 OAZ1P54368 228 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 COASYQ13057 564 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ELOAQ14241 798 aaKnown RBP6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 OGFOD2Q6N063 350 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 KCTD1Q719H9 257 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SIRT2Q8IXJ6 389 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ABI1Q8IZP0 508 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SAMD11Q96NU1 681 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 CRBNQ96SW2 442 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 SMOC2Q9H3U7 446 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 ZNF287Q9HBT7 754 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 EPB41L4AQ9HCS5 686 aaPredicted RBP6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 MTMR4Q9NYA4 1195 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 LRFN2Q9ULH4 789 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 PPME1Q9Y570 386 aa6.56□□□□□ -1.36
SMARCE1P3-201ENST00000553649 KCNMB2Q9Y691 235 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms