RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 SLC22A17Q8WUG5 538 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 BCL7CQ8WUZ0 217 aaPredicted RBP10.27□□□□□ -0.77
SYNE2-209ENST00000553308 NLRP7Q8WX94 980 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 LPPQ93052 612 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 NKD2Q969F2 451 aaPredicted RBP10.27□□□□□ -0.77
SYNE2-209ENST00000553308 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
SYNE2-209ENST00000553308 DZANK1Q9NVP4 752 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
SYNE2-209ENST00000553308 KLF18A0A0U1RQI7 1052 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 ESYT2A0FGR8 921 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 MEIS3P2A8K0S8 358 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 WDR64B1ANS9 1081 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 PI15O43692 258 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 CTSAP10619 480 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 CLCN5P51795 746 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 EXOSC10Q01780 885 aaKnown RBP10.26□□□□□ -0.77
SYNE2-209ENST00000553308 BMS1Q14692 1282 aaKnown RBP10.26□□□□□ -0.77
SYNE2-209ENST00000553308 PFKFB3Q16875 520 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-209ENST00000553308 ADSSL1Q8N142 457 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 REXO1Q8N1G1 1221 aaKnown RBP10.26□□□□□ -0.77
SYNE2-209ENST00000553308 PLCD3Q8N3E9 789 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 LENG9Q96B70 501 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 IGSF21Q96ID5 467 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 VN1R3Q9BXE9 311 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 ZMYND12Q9H0C1 365 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 NRDE2Q9H7Z3 1164 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 DISC1Q9NRI5 854 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 DACT1Q9NYF0 836 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 USTQ9Y2C2 406 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 IRAK3Q9Y616 596 aa10.26□□□□□ -0.77
SYNE2-209ENST00000553308 TMEM150BA6NC51 233 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 CHMP2AO43633 222 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 B4GALT3O60512 393 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 NPR3P17342 541 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 CIITAP33076 1130 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 ADD1P35611 737 aaKnown RBP10.25□□□□□ -0.77
SYNE2-209ENST00000553308 PHKA2P46019 1235 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 POLGP54098 1239 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-209ENST00000553308 TBC1D8BQ0IIM8 1120 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 ADCK5Q3MIX3 580 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 DDX53Q86TM3 631 aaKnown RBP10.25□□□□□ -0.77
SYNE2-209ENST00000553308 CABP7Q86V35 215 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 GJA10Q969M2 543 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 SFXN1Q9H9B4 322 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 CYP26B1Q9NR63 512 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 NRBP2Q9NSY0 501 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 TBC1D13Q9NVG8 400 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 DNAJB4Q9UDY4 337 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 NAP1L2Q9ULW6 460 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-209ENST00000553308 INPP5FQ9Y2H2 1132 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 C2orf16Q68DN1 1984 aa10.25□□□□□ -0.77
SYNE2-209ENST00000553308 A0A087WZ62 844 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 MSH4O15457 936 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 EDIL3O43854 480 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 SSBP05455 408 aaKnown RBP eCLIP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 GALTP07902 379 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 AOC1P19801 751 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 ID4P47928 161 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 SLC11A1P49279 550 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 GIT2Q14161 759 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 TARBP2Q15633 366 aaKnown RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 PTPN14Q15678 1187 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 MTERF2Q49AM1 385 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 NOMO2Q5JPE7 1267 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 RNF20Q5VTR2 975 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 TWF2Q6IBS0 349 aaKnown RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 GLB1LQ6UWU2 654 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 CCDC149Q6ZUS6 474 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 DHX32Q7L7V1 743 aaKnown RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 GPR149Q86SP6 731 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 CCDC105Q8IYK2 499 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 RASEFQ8IZ41 740 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 SH2D3AQ9BRG2 576 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 FDXACB1Q9BRP7 624 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 GCOM2Q9BZD3 368 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 GBP3Q9H0R5 595 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 UNC45AQ9H3U1 944 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 C6orf50Q9HD87 102 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 SEPT9Q9UHD8 586 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 DUSP12Q9UNI6 340 aa10.24□□□□□ -0.77
SYNE2-209ENST00000553308 PIN4Q9Y237 131 aaKnown RBP10.24□□□□□ -0.77
SYNE2-209ENST00000553308 NARSO43776 548 aaKnown RBP10.23□□□□□ -0.77
SYNE2-209ENST00000553308 GAS7O60861 476 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 OFD1O75665 1012 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 SFPQP23246 707 aaKnown RBP eCLIP10.23□□□□□ -0.77
SYNE2-209ENST00000553308 CLCN4P51793 760 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 RCAN1P53805 252 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 RNASELQ05823 741 aaKnown RBP10.23□□□□□ -0.77
SYNE2-209ENST00000553308 TDGQ13569 410 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 ANGPT1Q15389 498 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 LRCH2Q5VUJ6 765 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 OTOP3Q7RTS5 596 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 ERMP1Q7Z2K6 904 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 ZNF280BQ86YH2 543 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 SIX5Q8N196 739 aa10.23□□□□□ -0.77
SYNE2-209ENST00000553308 ACSF2Q96CM8 615 aaPredicted RBP10.23□□□□□ -0.77
SYNE2-209ENST00000553308 CCDC136Q96JN2 1154 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms