RNA–Protein interactions for RNA: ENST00000553131.5

ERBB3-221, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-221ENST00000553131 CNOT8Q9UFF9 292 aaKnown RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 NOC2LQ9Y3T9 749 aaKnown RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 KLRF2D3W0D1 207 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 AHCYL1O43865 530 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 MGRN1O60291 552 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 USP17L8P0C7I0 530 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 CCDC159P0C7I6 412 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 BYSLQ13895 437 aaKnown RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 BTG3Q14201 252 aaPredicted RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 DDB1Q16531 1140 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 SPRED3Q2MJR0 410 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 SPDYCQ5MJ68 293 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 C12orf60Q5U649 245 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 NANOGNBQ7Z5D8 188 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 TMC3Q7Z5M5 1100 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 ZNF444Q8N0Y2 327 aaPredicted RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 CCDC197Q8NCU1 140 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 MTMR9Q96QG7 549 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 UIMC1Q96RL1 719 aa8.67□□□□□ -1.02
ERBB3-221ENST00000553131 DDX47Q9H0S4 455 aaKnown RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 SEC63Q9UGP8 760 aaKnown RBP8.67□□□□□ -1.02
ERBB3-221ENST00000553131 CDK5RAP2Q96SN8 1893 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 DAPK3O43293 454 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 ATP2C2O75185 946 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 FESP07332 822 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 ALOX15P16050 662 aaPredicted RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 IBSPP21815 317 aaPredicted RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 DRD4P21917 467 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 INHBCP55103 352 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 MARSP56192 900 aaKnown RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 DHX9Q08211 1270 aaKnown RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 MYBPC3Q14896 1274 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 TRIM59Q8IWR1 403 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 REXO1Q8N1G1 1221 aaKnown RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 SNX29Q8TEQ0 813 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 BMP2KQ9NSY1 1161 aaPredicted RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 STX8Q9UNK0 236 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 NIP7Q9Y221 180 aaKnown RBP eCLIP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 UTP11Q9Y3A2 253 aaKnown RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 USP17L3A6NCW0 530 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 USP17L4A6NCW7 530 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 CCT8L1PA6NM43 557 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 NDUFB5O43674 189 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 PPARDQ03181 441 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 COASYQ13057 564 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 NAA25Q14CX7 972 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 FAM26FQ5R3K3 315 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 ERMARDQ5T6L9 678 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 USP17L1Q7RTZ2 530 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 PEX26Q7Z412 305 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 FBXO33Q7Z6M2 555 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 METTL13Q8N6R0 699 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 LRRC57Q8N9N7 239 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 CUL5Q93034 780 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 XPO6Q96QU8 1125 aaKnown RBP8.66□□□□□ -1.02
ERBB3-221ENST00000553131 TMEM47Q9BQJ4 181 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 TAOK3Q9H2K8 898 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 PRELID1Q9Y255 219 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 SLC45A1Q9Y2W3 748 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 CCDC88AQ3V6T2 1871 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 SBF2Q86WG5 1849 aa8.66□□□□□ -1.02
ERBB3-221ENST00000553131 PABPN1LA6NDY0 278 aaKnown RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 TMEM221A6NGB7 291 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 LSM1O15116 133 aaKnown RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 PPIP5K2O43314 1243 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 GSTA1P08263 222 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 GOLGA8HP0CJ92 632 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 GBP2P32456 591 aaPredicted RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 SLC30A9Q6PML9 568 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 RNF168Q8IYW5 571 aaPredicted RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 SYCE1Q8N0S2 351 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 RASGEF1CQ8N431 466 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 TMCO5AQ8N6Q1 288 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 GLIS3Q8NEA6 775 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 SPAG5Q96R06 1193 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 FAM129AQ9BZQ8 928 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 GANQ9H2C0 597 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 AASDHPPTQ9NRN7 309 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 PANK4Q9NVE7 773 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 AMACRQ9UHK6 382 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 MAFFQ9ULX9 164 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 WTIPA6NIX2 430 aaPredicted RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 BACH1O14867 736 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 B3GALNT1O75752 331 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 ANXA13P27216 316 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 ELF3P78545 371 aaPredicted RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 PTK2Q05397 1052 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 TMEM119Q4V9L6 283 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 LMBRD2Q68DH5 695 aaPredicted RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 SEC14L1Q92503 715 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 TLCD1Q96CP7 247 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 DYNLL2Q96FJ2 89 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 SCYL1Q96KG9 808 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 RAB17Q9H0T7 212 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 SUCLA2Q9P2R7 463 aaPredicted RBP8.65□□□□□ -1.02
ERBB3-221ENST00000553131 MINPP1Q9UNW1 487 aa8.65□□□□□ -1.02
ERBB3-221ENST00000553131 ATP8B3O60423 1300 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms