RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 TCF25Q9BQ70 676 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 PHF7Q9BWX1 381 aaPredicted RBP9.81□□□□□ -0.84
TMEM116-217ENST00000552801 TEKT3Q9BXF9 490 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 SLC26A6Q9BXS9 759 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 C22orf23Q9BZE7 217 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 TMEM117Q9H0C3 514 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 ELAC1Q9H777 363 aaKnown RBP9.81□□□□□ -0.84
TMEM116-217ENST00000552801 NGRNQ9NPE2 291 aaKnown RBP9.81□□□□□ -0.84
TMEM116-217ENST00000552801 TYW1Q9NV66 732 aaKnown RBP9.81□□□□□ -0.84
TMEM116-217ENST00000552801 DACT1Q9NYF0 836 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 NR2E1Q9Y466 385 aa9.81□□□□□ -0.84
TMEM116-217ENST00000552801 C9IYK1 514 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CPLX1O14810 134 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 C22orf31O95567 290 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 OATP04181 439 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 FGFR1P11362 822 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 SFNP31947 248 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 DEKP35659 375 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 ALDH7A1P49419 539 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CLK2P49760 499 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 MRE11P49959 708 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 JAK3P52333 1124 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CDC42EP1Q00587 391 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CAMK1Q14012 370 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 DUSP6Q16828 381 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 PROX2Q3B8N5 592 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 TPRNQ4KMQ1 711 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CPLX2Q6PUV4 134 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 TRIM67Q6ZTA4 783 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 FAM228AQ86W67 206 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 MRPS27Q92552 414 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 BRF1Q92994 677 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 MSLNLQ96KJ4 702 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 FBXL18Q96ME1 805 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 MRPL9Q9BYD2 267 aaKnown RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 ZMYND12Q9H0C1 365 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CDHR5Q9HBB8 845 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 DISC1Q9NRI5 854 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 SPG21Q9NZD8 308 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 SEPT9Q9UHD8 586 aaPredicted RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 LZTS1Q9Y250 596 aa9.8□□□□□ -0.84
TMEM116-217ENST00000552801 MAFBQ9Y5Q3 323 aaPredicted RBP9.8□□□□□ -0.84
TMEM116-217ENST00000552801 CARNS1A5YM72 827 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 PRPF3O43395 683 aaKnown RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 MARCH6O60337 910 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 MGEA5O60502 916 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 REC8O95072 547 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 SKIP12755 728 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 HOXB8P17481 243 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 ATF7P17544 494 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 CDC27P30260 824 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 PTPN5P54829 565 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 PRKCEQ02156 737 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 NHLH1Q02575 133 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 FUT2Q10981 343 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 SMC1AQ14683 1233 aaKnown RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 ADCK5Q3MIX3 580 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 TSGA10IPQ3SY00 556 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 LRCH2Q5VUJ6 765 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 KCNT2Q6UVM3 1135 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 LRRC71Q8N4P6 559 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 TMEM40Q8WWA1 233 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 CASP10Q92851 521 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 PHKBQ93100 1093 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 TMEM169Q96HH4 297 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 APOL5Q9BWW9 433 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 GCOM2Q9BZD3 368 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 INO80BQ9C086 356 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 IRF2BPLQ9H1B7 796 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 SLKQ9H2G2 1235 aaPredicted RBP9.79□□□□□ -0.84
TMEM116-217ENST00000552801 CLEC1BQ9P126 229 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 PCDHGC5Q9Y5F6 944 aa9.79□□□□□ -0.84
TMEM116-217ENST00000552801 IGLV3-22A0A075B6J6 115 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 DHX15O43143 795 aaKnown RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 HRO43593 1189 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 GPR32O75388 356 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 EOMESO95936 686 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 SFPQP23246 707 aaKnown RBP eCLIP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 SP100P23497 879 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 PRSS12P56730 875 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 ERVFC1P60507 584 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 ZXDAP98168 799 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 PLCB3Q01970 1234 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 RNASELQ05823 741 aaKnown RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 SSRP1Q08945 709 aaKnown RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 CBX2Q14781 532 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 MTERF2Q49AM1 385 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 TWF2Q6IBS0 349 aaKnown RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 MIER3Q7Z3K6 550 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 CRIPAKQ8N1N5 446 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 RASGRP4Q8TDF6 673 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 ZNF668Q96K58 619 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 RIT2Q99578 217 aa9.78□□□□□ -0.84
TMEM116-217ENST00000552801 JPH2Q9BR39 696 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 RNF26Q9BY78 433 aaPredicted RBP9.78□□□□□ -0.84
TMEM116-217ENST00000552801 ZBTB42B2RXF5 422 aa9.77□□□□□ -0.84
TMEM116-217ENST00000552801 LOC730098B7Z3J9 87 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms