RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 DEFB128Q7Z7B8 93 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 DAW1Q8N136 415 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 SYT2Q8N9I0 419 aaPredicted RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 MCPH1Q8NEM0 835 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 TCP11Q8WWU5 503 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 PSPC1Q8WXF1 523 aaKnown RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 BSNDQ8WZ55 320 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 LARP4BQ92615 738 aaKnown RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 CCDC43Q96MW1 224 aaKnown RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 POLR3FQ9H1D9 316 aaPredicted RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 AGO3Q9H9G7 860 aaKnown RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 IFT122Q9HBG6 1241 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 SUCLA2Q9P2R7 463 aaPredicted RBP10.14□□□□□ -0.79
CCDC59-207ENST00000552606 DNM3Q9UQ16 869 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 HPSEQ9Y251 543 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 COL4A3BPQ9Y5P4 624 aa10.14□□□□□ -0.79
CCDC59-207ENST00000552606 LAMA3Q16787 3333 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 TRIOBPQ9H2D6 2365 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 A0A1W2PQ27 194 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 A0A1W2PQ64 194 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 A0A1W2PQD8 194 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 PLA2G4BP0C869 781 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 DARSP14868 501 aaKnown RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 GLRA2P23416 452 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 GUCY2CP25092 1073 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 DNM2P50570 870 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 CRYBB1P53674 252 aaPredicted RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 LAMTOR4Q0VGL1 99 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 MCM6Q14566 821 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ARSHQ5FYA8 562 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 CDCA2Q69YH5 1023 aaPredicted RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ADALQ6DHV7 355 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 CNKSR3Q6P9H4 555 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ZNF365Q70YC5 407 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ZNF410Q86VK4 478 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 FAM228AQ86W67 206 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 IFNLR1Q8IU57 520 aaPredicted RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 RHPN2Q8IUC4 686 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 KSR1Q8IVT5 923 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ZNF710Q8N1W2 664 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 USP38Q8NB14 1042 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 TMEM87AQ8NBN3 555 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 LINC01599Q8WXQ3 324 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ZNF668Q96K58 619 aaPredicted RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 HS3ST6Q96QI5 342 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 IFIH1Q9BYX4 1025 aaKnown RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 UBE2OQ9C0C9 1292 aaKnown RBP10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ERVK-5Q9HDB9 667 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 KCND2Q9NZV8 630 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 CCDC39Q9UFE4 941 aa10.13□□□□□ -0.79
CCDC59-207ENST00000552606 ADGRA3Q8IWK6 1321 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 LAMA2P24043 3122 aaKnown RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 A0A087WZ62 844 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 A0A1W2PPC1 479 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 HIP1RO75146 1068 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 BAIAP3O94812 1187 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 PFKFB1P16118 471 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 CMA1P23946 247 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 CD52P31358 61 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 STAT6P42226 847 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 POU5F1BQ06416 359 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 MXD4Q14582 209 aaPredicted RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 SHHQ15465 462 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 RRAGBQ5VZM2 374 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 CCDC73Q6ZRK6 1079 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 CLEC17AQ6ZS10 378 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 GPBP1Q86WP2 473 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 RPUSD2Q8IZ73 545 aaKnown RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 TDHQ8IZJ6 230 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 PDILTQ8N807 584 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 RNF149Q8NC42 400 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 DBF4BQ8NFT6 615 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 RASSF8Q8NHQ8 419 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 PRPF31Q8WWY3 499 aaKnown RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 HERVK_113Q902F9 699 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 APBB2Q92870 758 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 NLRP4Q96MN2 994 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 REEP2Q9BRK0 252 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 FDXACB1Q9BRP7 624 aaPredicted RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 TIPINQ9BVW5 301 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 NFKBIZQ9BYH8 718 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 TMX1Q9H3N1 280 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 CUEDC2Q9H467 287 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 GOLPH3LQ9H4A5 285 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 MINDY3Q9H8M7 445 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 CXXC1Q9P0U4 656 aaPredicted RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 GINS2Q9Y248 185 aa10.12□□□□□ -0.79
CCDC59-207ENST00000552606 NOC2LQ9Y3T9 749 aaKnown RBP10.12□□□□□ -0.79
CCDC59-207ENST00000552606 NPHP3-ACAD11A0A0J9YXS1 232 aa10.11□□□□□ -0.79
CCDC59-207ENST00000552606 MYMKA6NI61 221 aa10.11□□□□□ -0.79
CCDC59-207ENST00000552606 ASAP2O43150 1006 aa10.11□□□□□ -0.79
CCDC59-207ENST00000552606 ACTN4O43707 911 aaKnown RBP10.11□□□□□ -0.79
CCDC59-207ENST00000552606 MGEA5O60502 916 aa10.11□□□□□ -0.79
CCDC59-207ENST00000552606 SSBP05455 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCDC59-207ENST00000552606 PYGBP11216 843 aa10.11□□□□□ -0.79
CCDC59-207ENST00000552606 EIF4BP23588 611 aaKnown RBP10.11□□□□□ -0.79
CCDC59-207ENST00000552606 NAMPTP43490 491 aa10.11□□□□□ -0.79
CCDC59-207ENST00000552606 ZNF131P52739 623 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms