RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, human

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGFBR1-209	ENST00000552516	JPH1	Q9HDC5	661 aa	Predicted RBP	11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CNOT8	Q9UFF9	292 aa	Known RBP	11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MRFAP1	Q9Y605	127 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ZNF233	A6NK53	670 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SGK1	O00141	431 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	IREB2	P48200	963 aa	Known RBP	11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	RCAN1	P53805	252 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ZBTB16	Q05516	673 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	FUT2	Q10981	343 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ZNF568	Q3ZCX4	644 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	DAB2IP	Q5VWQ8	1189 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	C7orf25	Q9BPX7	421 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	TYW1	Q9NV66	732 aa	Known RBP	11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CCDC78	A2IDD5	438 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	TNNC2	P02585	160 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	TUBB4A	P04350	444 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	TXN	P10599	105 aa	Known RBP	11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GAP43	P17677	238 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PRPH	P41219	470 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GDAP1	Q8TB36	358 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	HSPBP1	Q9NZL4	362 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CYP2C8	P10632	490 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CCDC89	Q8N998	374 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	OSGEP	Q9NPF4	335 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	FAM184B	Q9ULE4	1060 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PCDHA10	Q9Y5I2	948 aa		11.63	□□□□□ -0.55
TGFBR1-209	ENST00000552516	FER	P16591	822 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ATP11A	P98196	1134 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SGO2	Q562F6	1265 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	FBXO16	Q8IX29	292 aa	Predicted RBP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	NME8	Q8N427	588 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GPATCH11	Q8N954	259 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	RBM12	Q9NTZ6	932 aa	Known RBP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SLC9A2	Q9UBY0	812 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MAD1L1	Q9Y6D9	718 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	NKRF	O15226	690 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GJB6	O95452	261 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	EYA4	O95677	639 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GJB1	P08034	283 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CYP2B6	P20813	491 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	RGS7	P49802	495 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PRKCE	Q02156	737 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	OR6B2	Q6IFH4	312 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PDXDC1	Q6P996	788 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	KAT5	Q92993	513 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	RIOX1	Q9H6W3	641 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	KBTBD4	Q9NVX7	518 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	TADA3	O75528	432 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	DUSP9	Q99956	384 aa	Known RBP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ACAD9	Q9H845	621 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PLEKHG2	Q9H7P9	1386 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MRC1	P22897	1456 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PSMD2	Q13200	908 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	HAS1	Q92839	578 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MTA3	Q9BTC8	594 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CEP72	Q9P209	647 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	hCG_1984214	I3L0E3	225 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	KRT14	P02533	472 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MYL3	P08590	195 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MAN1A1	P33908	653 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GALC	P54803	685 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MDM2	Q00987	491 aa	Predicted RBP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	LY6K	Q17RY6	165 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SMTNL2	Q2TAL5	461 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	DCLK2	Q8N568	766 aa		11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ZNF713	Q8N859	430 aa	Predicted RBP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	NOVA2	Q9UNW9	492 aa	Known RBP	11.62	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GOLGA8CP	A6NN73	597 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CACNB2	Q08289	660 aa	Predicted RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	BRD3	Q15059	726 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SLC35G1	Q2M3R5	365 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PNMA8A	Q86V59	439 aa	Predicted RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	HDAC7	Q8WUI4	952 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	RBAK	Q9NYW8	714 aa	Predicted RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	DKC1	O60832	514 aa	Known RBP eCLIP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CLCN3	P51790	818 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	JAG1	P78504	1218 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	GIT2	Q14161	759 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PDIA5	Q14554	519 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SH3BP5L	Q7L8J4	393 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	HOXC10	Q9NYD6	342 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ARHGAP20	Q9P2F6	1191 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	NUB1	Q9Y5A7	615 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	AKAP12	Q02952	1782 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516		H7C0C1	242 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PGRMC1	O00264	195 aa	Known RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	CAPN9	O14815	690 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	STAM2	O75886	525 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ATP5O	P48047	213 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	MXRA7	P84157	204 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	KRT81	Q14533	505 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	LRRC14	Q15048	493 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	SYCE1	Q8N0S2	351 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	OR6B3	Q8NGW1	331 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ZBTB45	Q96K62	511 aa	Predicted RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	ADPGK	Q9BRR6	497 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	HEY1	Q9Y5J3	304 aa		11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	RGS16	O15492	202 aa	Predicted RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	DYNC1LI2	O43237	492 aa	Predicted RBP	11.61	□□□□□ -0.55
TGFBR1-209	ENST00000552516	PSMC5	P62195	406 aa		11.61	□□□□□ -0.55

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