RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 RNF149Q8NC42 400 aa18.17■□□□□ 0.5
GCN1-209ENST00000551920 YBX2Q9Y2T7 364 aaKnown RBP18.17■□□□□ 0.5
GCN1-209ENST00000551920 COL4A6Q14031 1691 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 PLA2G4BP0C869 781 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 MYOGP15173 224 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 ANP32AP39687 249 aaKnown RBP18.16■□□□□ 0.5
GCN1-209ENST00000551920 CDC42EP1Q00587 391 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 DSC3Q14574 896 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 NAALADL2Q58DX5 795 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 FAM102BQ5T8I3 360 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 RINT1Q6NUQ1 792 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 SHC4Q6S5L8 630 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 C1orf186Q6ZWK4 172 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 MYOCDQ8IZQ8 938 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 SYT2Q8N9I0 419 aaPredicted RBP18.16■□□□□ 0.5
GCN1-209ENST00000551920 PHOSPHO2Q8TCD6 241 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 KCNG4Q8TDN1 519 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 CALML4Q96GE6 196 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 GCOM2Q9BZD3 368 aaPredicted RBP18.16■□□□□ 0.5
GCN1-209ENST00000551920 TSPYL2Q9H2G4 693 aaPredicted RBP18.16■□□□□ 0.5
GCN1-209ENST00000551920 RCOR1Q9UKL0 485 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 CDH23Q9H251 3354 aa18.16■□□□□ 0.5
GCN1-209ENST00000551920 ENPP3O14638 875 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 GPR182O15218 404 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 ARHGEF15O94989 841 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 SSBP05455 408 aaKnown RBP eCLIP18.15■□□□□ 0.5
GCN1-209ENST00000551920 DNAJB2P25686 324 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 PTENP60484 403 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 MXD4Q14582 209 aaPredicted RBP18.15■□□□□ 0.5
GCN1-209ENST00000551920 CRIPAKQ8N1N5 446 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 KCTD17Q8N5Z5 321 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 LEO1Q8WVC0 666 aaPredicted RBP18.15■□□□□ 0.5
GCN1-209ENST00000551920 RAD54LQ92698 747 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 CFAP45Q9UL16 551 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 PCDHA7Q9UN72 937 aa18.15■□□□□ 0.5
GCN1-209ENST00000551920 GBF1Q92538 1859 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 NPHP3-ACAD11A0A0J9YXS1 232 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 ASAP2O43150 1006 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 CUTAO60888 179 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 HIP1RO75146 1068 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 GJB5O95377 273 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 AMHP03971 560 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 NCLP19338 710 aaKnown RBP18.14■□□□□ 0.49
GCN1-209ENST00000551920 GUCY2CP25092 1073 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 MCM6Q14566 821 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 ARSHQ5FYA8 562 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 CDCA2Q69YH5 1023 aaPredicted RBP18.14■□□□□ 0.49
GCN1-209ENST00000551920 FAM117BQ6P1L5 589 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 IFNLR1Q8IU57 520 aaPredicted RBP18.14■□□□□ 0.49
GCN1-209ENST00000551920 RASSF8Q8NHQ8 419 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 ADAM2Q99965 735 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 KIFC3Q9BVG8 833 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 FTHL17Q9BXU8 183 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 ADGRA3Q8IWK6 1321 aa18.14■□□□□ 0.49
GCN1-209ENST00000551920 LCHNA4D1U4 455 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 SFPQP23246 707 aaKnown RBP eCLIP18.13■□□□□ 0.49
GCN1-209ENST00000551920 PHKA2P46019 1235 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 ME1P48163 572 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 KRT85P78386 507 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 NUCB2P80303 420 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 MBTD1Q05BQ5 628 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 RAD51AP2Q09MP3 1159 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 AMHR2Q16671 573 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 SRGAP1Q7Z6B7 1085 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 LARP4BQ92615 738 aaKnown RBP18.13■□□□□ 0.49
GCN1-209ENST00000551920 TOP1MTQ969P6 601 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 NFKBIZQ9BYH8 718 aa18.13■□□□□ 0.49
GCN1-209ENST00000551920 LRRIQ4A6NIV6 560 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 C9IYK1 514 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 TXLNAP40222 546 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
GCN1-209ENST00000551920 POU5F1BQ06416 359 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 TFDP1Q14186 410 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 DHX8Q14562 1220 aaKnown RBP18.12■□□□□ 0.49
GCN1-209ENST00000551920 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 GPBP1Q86WP2 473 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 KIFAP3Q92845 792 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 TIFAQ96CG3 184 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 PANK2Q9BZ23 570 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 NKX2-4Q9H2Z4 354 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 TTYH1Q9H313 450 aaPredicted RBP18.12■□□□□ 0.49
GCN1-209ENST00000551920 RC3H2Q9HBD1 1191 aaKnown RBP18.12■□□□□ 0.49
GCN1-209ENST00000551920 GDPD2Q9HCC8 539 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 TSHZ2Q9NRE2 1034 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 RGS18Q9NS28 235 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 AGPAT5Q9NUQ2 364 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 STK17AQ9UEE5 414 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 PCDHA11Q9Y5I1 949 aa18.12■□□□□ 0.49
GCN1-209ENST00000551920 DENND3A2RUS2 1198 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 TSPAN1O60635 241 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 UPP2O95045 317 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 EDN1P05305 212 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 CA3P07451 260 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 HOXA11P31270 313 aaPredicted RBP18.11■□□□□ 0.49
GCN1-209ENST00000551920 NAMPTP43490 491 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 HTRA4P83105 476 aaPredicted RBP18.11■□□□□ 0.49
GCN1-209ENST00000551920 E2F4Q16254 413 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 ODR4Q5SWX8 454 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 RRAGBQ5VZM2 374 aa18.11■□□□□ 0.49
GCN1-209ENST00000551920 RESP18Q5W5W9 173 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms