RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 GBP2P32456 591 aaPredicted RBP17.34■□□□□ 0.37
CACNB3-220ENST00000551716 CLCN4P51793 760 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 PTPN14Q15678 1187 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 ZNF528Q3MIS6 628 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 SPECC1Q5M775 1068 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 EFCAB12Q6NXP0 572 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 CASC1Q6TDU7 716 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 GLB1LQ6UWU2 654 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 SHDQ96IW2 340 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 FAM167AQ96KS9 214 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 KLHL5Q96PQ7 755 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 TRAIPQ9BWF2 469 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 WDR6Q9NNW5 1121 aaKnown RBP17.34■□□□□ 0.37
CACNB3-220ENST00000551716 SSX2IPQ9Y2D8 614 aa17.34■□□□□ 0.37
CACNB3-220ENST00000551716 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 SPTLC1O15269 473 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 PLEKHA8P1O95397 391 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 DCNP07585 359 aaKnown RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 DARSP14868 501 aaKnown RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 ATP4AP20648 1035 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 RNASELQ05823 741 aaKnown RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 VARS2Q5ST30 1063 aaKnown RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 NFXL1Q6ZNB6 911 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 HEATR3Q7Z4Q2 680 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 SMAP1Q8IYB5 467 aaPredicted RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 RUFY2Q8WXA3 655 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 SCLT1Q96NL6 688 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 MYL10Q9BUA6 226 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 GLT8D2Q9H1C3 349 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 RIC8AQ9NPQ8 531 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 MRPL17Q9NRX2 175 aaKnown RBP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 TBC1D22BQ9NU19 505 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.36
CACNB3-220ENST00000551716 DLGAP2Q9P1A6 1054 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 NCDNQ9UBB6 729 aa17.33■□□□□ 0.36
CACNB3-220ENST00000551716 CCDC69A6NI79 296 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 PSAPP07602 524 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 CLCN3P51790 818 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 NOMO2Q5JPE7 1267 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 ZNF746Q6NUN9 644 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-220ENST00000551716 TMEM173Q86WV6 379 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-220ENST00000551716 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 RSAD2Q8WXG1 361 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
CACNB3-220ENST00000551716 ARHGEF3Q9NR81 526 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 NRBP2Q9NSY0 501 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 TCEAL9Q9UHQ7 104 aa17.32■□□□□ 0.36
CACNB3-220ENST00000551716 CACNA1GO43497 2377 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 IPO5O00410 1097 aaKnown RBP17.31■□□□□ 0.36
CACNB3-220ENST00000551716 DHX15O43143 795 aaKnown RBP17.31■□□□□ 0.36
CACNB3-220ENST00000551716 ALDH2P05091 517 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 CNPP09543 421 aaKnown RBP17.31■□□□□ 0.36
CACNB3-220ENST00000551716 SREBF1P36956 1147 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 PHKA2P46019 1235 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 ATXN1P54253 815 aaKnown RBP17.31■□□□□ 0.36
CACNB3-220ENST00000551716 ANTXR2P58335 489 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 LMNB2Q03252 620 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 AAMPQ13685 434 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 DCLRE1AQ6PJP8 1040 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 PLA2G4DQ86XP0 818 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 CMTR1Q8N1G2 835 aaKnown RBP17.31■□□□□ 0.36
CACNB3-220ENST00000551716 GPR152Q8TDT2 470 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 NRDE2Q9H7Z3 1164 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 SLC2A4RGQ9NR83 387 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 TBC1D13Q9NVG8 400 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 FBXO4Q9UKT5 387 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 PCDHA10Q9Y5I2 948 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 FRYLO94915 3013 aa17.31■□□□□ 0.36
CACNB3-220ENST00000551716 LILRB3O75022 631 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 GPC3P51654 580 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 AP3B2Q13367 1082 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 ST3GAL2Q16842 350 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 PPP1R18Q6NYC8 613 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-220ENST00000551716 LINC01465Q8N7H1 131 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 HDAC7Q8WUI4 952 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 NLRP7Q8WX94 980 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 ATRIPQ8WXE1 791 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 RTKNQ9BST9 563 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 ANO3Q9BYT9 981 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 GCOM2Q9BZD3 368 aaPredicted RBP17.3■□□□□ 0.36
CACNB3-220ENST00000551716 CDV3Q9UKY7 258 aaKnown RBP17.3■□□□□ 0.36
CACNB3-220ENST00000551716 PCDHGA2Q9Y5H1 932 aa17.3■□□□□ 0.36
CACNB3-220ENST00000551716 CLUHO75153 1309 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 N4BP1O75113 896 aaKnown RBP17.29■□□□□ 0.36
CACNB3-220ENST00000551716 ZNF623O75123 536 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 C1RP00736 705 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 ADH1AP07327 375 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 LIFRP42702 1097 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 RAB27AP51159 221 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 NAPAP54920 295 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 STARD6P59095 220 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 NUCB1Q02818 461 aa17.29■□□□□ 0.36
CACNB3-220ENST00000551716 TWF2Q6IBS0 349 aaKnown RBP17.29■□□□□ 0.36
CACNB3-220ENST00000551716 TRMT1LQ7Z2T5 733 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms