RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 KSR1Q8IVT5 923 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 LPPQ93052 612 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 FDXACB1Q9BRP7 624 aaPredicted RBP20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 NIFKQ9BYG3 293 aaKnown RBP20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 SH3GLB2Q9NR46 395 aa20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 SEPT9Q9UHD8 586 aaPredicted RBP20.16■□□□□ 0.82
PRPF40B-215ENST00000551418 C2orf71A6NGG8 1288 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 HOXA2O43364 376 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 SFNP31947 248 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 Q4G0T1 1027 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 MRPL43Q8N983 215 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 AUTS2Q8WXX7 1259 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 KCNH6Q9H252 994 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 NGRNQ9NPE2 291 aaKnown RBP20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 PCDHA4Q9UN74 947 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 KMT2EQ8IZD2 1858 aa20.15■□□□□ 0.82
PRPF40B-215ENST00000551418 CYP3A7-CYP3A51PA0A087WV96 503 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 IGKV6-21A0A0C4DH24 114 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 DDX11L8A8MPP1 907 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 EML1O00423 815 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 CLASP2O75122 1294 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 EOMESO95936 686 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 WEE2P0C1S8 567 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 CYP3A7P24462 503 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 PSMA5P28066 241 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 BCAR1P56945 870 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 KRT17Q04695 432 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 SSRP1Q08945 709 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 XKR3Q5GH77 459 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 RUFY3Q7L099 469 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 ZNF579Q8NAF0 562 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 ETNPPLQ8TBG4 499 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 BCL7CQ8WUZ0 217 aaPredicted RBP20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 ASIC4Q96FT7 647 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 MBOAT7Q96N66 472 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 ZSWIM6Q9HCJ5 1215 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 HCFC2Q9Y5Z7 792 aa20.14■□□□□ 0.81
PRPF40B-215ENST00000551418 SLC37A4O43826 429 aa20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 PPM1AP35813 382 aa20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 VCPP55072 806 aaKnown RBP20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 STK3Q13188 491 aa20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 PLA2G4FQ68DD2 849 aa20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 ANO5Q75V66 913 aa20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 C12orf76Q8N812 135 aaPredicted RBP20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 GCOM2Q9BZD3 368 aaPredicted RBP20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 SUCLA2Q9P2R7 463 aaPredicted RBP20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 KCNJ14Q9UNX9 436 aa20.13■□□□□ 0.81
PRPF40B-215ENST00000551418 B4GALT3O60512 393 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 CXCL14O95715 111 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 PDGFBP01127 241 aaPredicted RBP20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 PHKA2P46019 1235 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 SIGLEC14Q08ET2 396 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 INF2Q27J81 1249 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 RHPN2Q8IUC4 686 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 ZNF710Q8N1W2 664 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 POMKQ9H5K3 350 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 GJB4Q9NTQ9 266 aa20.12■□□□□ 0.81
PRPF40B-215ENST00000551418 CA8P35219 290 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 NPEPPSP55786 919 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 TCF15Q12870 199 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 SMC1AQ14683 1233 aaKnown RBP20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 PTPN21Q16825 1174 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 TRIM22Q8IYM9 498 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 FBXL6Q8N531 539 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 RDM1Q8NG50 284 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 SMOC2Q9H3U7 446 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 NRDE2Q9H7Z3 1164 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 DACT1Q9NYF0 836 aa20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 WRAP73Q9P2S5 460 aaPredicted RBP20.11■□□□□ 0.81
PRPF40B-215ENST00000551418 FSD2A1L4K1 749 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 ZC3H11AO75152 810 aaKnown RBP eCLIP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 MAFO75444 373 aaPredicted RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 REC8O95072 547 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 SRGAP2BP0DMP2 458 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 HOXB8P17481 243 aaPredicted RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 ALDH7A1P49419 539 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 AFF1P51825 1210 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 TWF2Q6IBS0 349 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 VPS52Q8N1B4 723 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 DAGLBQ8NCG7 672 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 NLRP4Q96MN2 994 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 VN1R3Q9BXE9 311 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 CHST12Q9NRB3 414 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 DNAJB4Q9UDY4 337 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 DDX25Q9UHL0 483 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 PIN4Q9Y237 131 aaKnown RBP20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 INPP5FQ9Y2H2 1132 aa20.1■□□□□ 0.81
PRPF40B-215ENST00000551418 C2CD4DB7Z1M9 353 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 OFD1O75665 1012 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 DEXIO95424 95 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 ZNF280BQ86YH2 543 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 SUGP1Q8IWZ8 645 aaKnown RBP20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 CASP10Q92851 521 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 ZNF274Q96GC6 653 aaPredicted RBP20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 ZBP1Q9H171 429 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 ADAM7Q9H2U9 754 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 IFT122Q9HBG6 1241 aa20.09■□□□□ 0.81
PRPF40B-215ENST00000551418 FAM105AQ9NUU6 356 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms