RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MLXIPQ9HAP2 919 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 SEPT9Q9UHD8 586 aaPredicted RBP12.58□□□□□ -0.4
RAB5C-208ENST00000551338 FRMD4BQ9Y2L6 1034 aa12.58□□□□□ -0.4
RAB5C-208ENST00000551338 MGAMO43451 1857 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ANK1P16157 1881 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 EXOC3O60645 756 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 TFRCP02786 760 aaKnown RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ATP1A1P05023 1023 aaKnown RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ADRB2P07550 413 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 H2AFXP16104 143 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ATP4AP20648 1035 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 UBA1P22314 1058 aaKnown RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 PRKCIP41743 596 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 MAGEA1P43355 309 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 NPTX2P47972 431 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 SOX10P56693 466 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 SNRPFP62306 86 aaKnown RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 MYL7Q01449 175 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 KIF5AQ12840 1032 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 XKR3Q5GH77 459 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 FBXO38Q6PIJ6 1188 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 SEPT14Q6ZU15 432 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 SRGAP1Q7Z6B7 1085 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 CEP112Q8N8E3 955 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 SLC17A8Q8NDX2 589 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 TMEM161BQ8NDZ6 487 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ZSWIM2Q8NEG5 633 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 PLEKHO2Q8TD55 490 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 SPIRE2Q8WWL2 714 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 UBXN4Q92575 508 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 KIFC3Q9BVG8 833 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 PCIF1Q9H4Z3 704 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 TXNRD2Q9NNW7 524 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 CAPN6Q9Y6Q1 641 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 DUSP10Q9Y6W6 482 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ADGRA3Q8IWK6 1321 aa12.57□□□□□ -0.4
RAB5C-208ENST00000551338 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
RAB5C-208ENST00000551338 IGKV6D-21A0A0A0MT36 114 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 GSTTP1A0A1W2PQM5 241 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 MACROD2A1Z1Q3 448 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 MAPK13O15264 365 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 DGAT1O75907 488 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 SLC25A27O95847 323 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 COPB2P35606 906 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 RTP1P59025 263 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-208ENST00000551338 KLHL30Q0D2K2 578 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
RAB5C-208ENST00000551338 WHAMMP3Q1A5X7 153 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 MTERF2Q49AM1 385 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 C1orf220Q5T0J3 134 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 TEX35Q5T0J7 233 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 LDLRAD1Q5T700 205 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 PAPD7Q5XG87 772 aaKnown RBP12.56□□□□□ -0.4
RAB5C-208ENST00000551338 SLC39A4Q6P5W5 647 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 CYFIP1Q7L576 1253 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 ARMC9Q7Z3E5 817 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 IRF2BP2Q7Z5L9 587 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 XXYLT1Q8NBI6 393 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 MCPH1Q8NEM0 835 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 OLIG1Q8TAK6 271 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 SECISBP2LQ93073 1101 aaKnown RBP12.56□□□□□ -0.4
RAB5C-208ENST00000551338 SPAG5Q96R06 1193 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 INTS2Q9H0H0 1204 aaKnown RBP12.56□□□□□ -0.4
RAB5C-208ENST00000551338 ATP6V0A4Q9HBG4 840 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 ZNF302Q9NR11 478 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 HSPBP1Q9NZL4 362 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 RBPJLQ9UBG7 517 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 TBX20Q9UMR3 447 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 NENFQ9UMX5 172 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 EMSYQ7Z589 1322 aa12.56□□□□□ -0.4
RAB5C-208ENST00000551338 EVPLQ92817 2033 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 TRPM7Q96QT4 1865 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 A0A087X0T9 212 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 CCDC169A6NNP5 214 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 ANKRD63C9JTQ0 380 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 SOCS7O14512 581 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 TACC1O75410 805 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 FARP2O94887 1054 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 MOCS3O95396 460 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 OATP04181 439 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 FAM228BP0C875 321 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 KRT13P13646 458 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 VAMP7P51809 220 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 DLG4P78352 724 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 ARID5AQ03989 594 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 HSP90AA2PQ14568 343 aaPredicted RBP12.55□□□□□ -0.4
RAB5C-208ENST00000551338 SLC18A3Q16572 532 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 Q3C1V9 767 aa12.55□□□□□ -0.4
RAB5C-208ENST00000551338 EAPPQ56P03 285 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms