RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 ASCC2Q9H1I8 757 aaPredicted RBP13.13□□□□□ -0.31
NR4A1-215ENST00000550557 TUFT1Q9NNX1 390 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
NR4A1-215ENST00000550557 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
NR4A1-215ENST00000550557 VGLL4Q14135 290 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 HAUS6Q7Z4H7 955 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 ZNF653Q96CK0 615 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
NR4A1-215ENST00000550557 UTP11Q9Y3A2 253 aaKnown RBP13.13□□□□□ -0.31
NR4A1-215ENST00000550557 H7C0C1 242 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 ATP5OP48047 213 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 PRKCEQ02156 737 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 PPIL2Q13356 520 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 CCDC121Q6ZUS5 278 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 FBXO16Q8IX29 292 aaPredicted RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 GPRASP2Q96D09 838 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 P2RX7Q99572 595 aaKnown RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 FUCA2Q9BTY2 467 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 TSKSQ9UJT2 592 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 MAGED2Q9UNF1 606 aaPredicted RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 PQBP1O60828 265 aaKnown RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 CCNYQ8ND76 341 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 MOV10L1Q9BXT6 1211 aaKnown RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 CDC23Q9UJX2 597 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 AGO2Q9UKV8 859 aaKnown RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 RFC5P40937 340 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 CYP27A1Q02318 531 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 DNAJC21Q5F1R6 531 aaKnown RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 EFCAB12Q6NXP0 572 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
NR4A1-215ENST00000550557 MORC2Q9Y6X9 1032 aaPredicted RBP13.12□□□□□ -0.31
NR4A1-215ENST00000550557 CTIFO43310 598 aaKnown RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 KPNA6O60684 536 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 HIP1RO75146 1068 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 PNMA6AP0CW24 399 aaPredicted RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 GUCY1A2P33402 732 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 EPHB1P54762 984 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 PRPSAP1Q14558 356 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 C8orf74Q6P047 294 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SPATA24Q86W54 205 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 ENGASEQ8NFI3 743 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 FAM217BQ9NTX9 383 aaPredicted RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 FZD1Q9UP38 647 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SAR1BQ9Y6B6 198 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 A8MXQ7 604 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 EYA4O95677 639 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 TAOK1Q7L7X3 1001 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SKA2Q8WVK7 121 aaPredicted RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SEPT8Q92599 483 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 EXOC4Q96A65 974 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 RIT2Q99578 217 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 MRPL47Q9HD33 250 aaKnown RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 TMEM39AQ9NV64 488 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 DONSONQ9NYP3 566 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SALL1Q9NSC2 1324 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 PRRG1O14668 218 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 ADCY3O60266 1144 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 AKR1A1P14550 325 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 ZNF18P17022 549 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 DSG3P32926 999 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 OR1G1P47890 313 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 ALDH7A1P49419 539 aaKnown RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 LONRF2Q1L5Z9 754 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 XPNPEP3Q9NQH7 507 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 KCNH7Q9NS40 1196 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 RWDD2AQ9UIY3 292 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 PDS5AQ29RF7 1337 aaKnown RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SETD1AO15047 1707 aaKnown RBP13.11□□□□□ -0.31
NR4A1-215ENST00000550557 TBX3O15119 743 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 CASP14P31944 242 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 RBL2Q08999 1139 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 CFAP157Q5JU67 520 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 TTC39CQ8N584 583 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 SH3TC2Q8TF17 1288 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 IDI2Q9BXS1 227 aa13.11□□□□□ -0.31
NR4A1-215ENST00000550557 NR3C1P04150 777 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 SMARCA1P28370 1054 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 DUOXA2Q1HG44 320 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 KAZNQ674X7 775 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 ERICH1Q86X53 443 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 PDE11AQ9HCR9 933 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 GFPT2O94808 682 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 GCLMP48507 274 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
NR4A1-215ENST00000550557 MESDQ14696 234 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 EMC2Q15006 297 aa13.1□□□□□ -0.31
NR4A1-215ENST00000550557 APOBEC3HQ6NTF7 200 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms