RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 WDR81Q562E7 1941 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 DEXIO95424 95 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 TECP42680 631 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 ZXDAP98168 799 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 MTERF2Q49AM1 385 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 MOXD1Q6UVY6 613 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 TMC7Q7Z402 723 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 FAM177A1Q8N128 213 aaPredicted RBP24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 SLC39A11Q8N1S5 342 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 ETNPPLQ8TBG4 499 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 TRAIPQ9BWF2 469 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 GCOM2Q9BZD3 368 aaPredicted RBP24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 CHST12Q9NRB3 414 aa24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 SEPT9Q9UHD8 586 aaPredicted RBP24.41■■□□□ 1.5
SMARCC2-210ENST00000550519 TMEM150BA6NC51 233 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 TMEM221A6NGB7 291 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 M0R296 226 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 HOXB8P17481 243 aaPredicted RBP24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 GALNT17Q6IS24 598 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 HELQQ8TDG4 1101 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 CYP46A1Q9Y6A2 500 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 WDFY4Q6ZS81 3184 aa24.4■■□□□ 1.5
SMARCC2-210ENST00000550519 CPLX1O14810 134 aa24.39■■□□□ 1.49
SMARCC2-210ENST00000550519 MRPL43Q8N983 215 aaKnown RBP24.39■■□□□ 1.49
SMARCC2-210ENST00000550519 SH2D3AQ9BRG2 576 aa24.39■■□□□ 1.49
SMARCC2-210ENST00000550519 MRPL9Q9BYD2 267 aaKnown RBP24.39■■□□□ 1.49
SMARCC2-210ENST00000550519 A0A087WZ62 844 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 MAFO75444 373 aaPredicted RBP24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 DNM2P50570 870 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 LLGL2Q6P1M3 1020 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 RSPH1Q8WYR4 309 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 PBXIP1Q96AQ6 731 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 AIFM3Q96NN9 605 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 FDXACB1Q9BRP7 624 aaPredicted RBP24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 TM6SF1Q9BZW5 370 aa24.38■■□□□ 1.49
SMARCC2-210ENST00000550519 C2orf71A6NGG8 1288 aa24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 PHKA2P46019 1235 aa24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 ALDH7A1P49419 539 aaKnown RBP24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 SMC1AQ14683 1233 aaKnown RBP24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 NONOQ15233 471 aaKnown RBP eCLIP24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 ANO5Q75V66 913 aa24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 ZNF410Q86VK4 478 aa24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 LARP6Q9BRS8 491 aaKnown RBP24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 INO80BQ9C086 356 aaPredicted RBP24.37■■□□□ 1.49
SMARCC2-210ENST00000550519 DDX11L8A8MPP1 907 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 SFPQP23246 707 aaKnown RBP eCLIP24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 MRE11P49959 708 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 BCAR1P56945 870 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 PSMC5P62195 406 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 KRT25Q7Z3Z0 450 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 CASP10Q92851 521 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 APOL5Q9BWW9 433 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 SUCLA2Q9P2R7 463 aaPredicted RBP24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 DDX25Q9UHL0 483 aaKnown RBP24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 HCFC2Q9Y5Z7 792 aa24.36■■□□□ 1.49
SMARCC2-210ENST00000550519 NT5C1B-RDH14C9J2C7 533 aa24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 SLC37A4O43826 429 aa24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 SIGLEC14Q08ET2 396 aa24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 INF2Q27J81 1249 aa24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 TWF2Q6IBS0 349 aaKnown RBP24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 CPLX2Q6PUV4 134 aaKnown RBP24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 RHPN2Q8IUC4 686 aa24.35■■□□□ 1.49
SMARCC2-210ENST00000550519 ZDBF2Q9HCK1 2354 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 EML1O00423 815 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 SKIP12755 728 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 STK3Q13188 491 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 PPP2R5CQ13362 524 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 TPRNQ4KMQ1 711 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 LPPQ93052 612 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 TMEM169Q96HH4 297 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 JPH2Q9BR39 696 aaPredicted RBP24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 KCNMB3Q9NPA1 279 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 KCNJ14Q9UNX9 436 aa24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 PIN4Q9Y237 131 aaKnown RBP24.34■■□□□ 1.49
SMARCC2-210ENST00000550519 CLASP2O75122 1294 aaKnown RBP24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 ZNF623O75123 536 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 PTPN21Q16825 1174 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 LETM2Q2VYF4 491 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 IER5LQ5T953 404 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 PLA2G4FQ68DD2 849 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 KSR1Q8IVT5 923 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 FBXL6Q8N531 539 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 ASIC4Q96FT7 647 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 FAM20AQ96MK3 541 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 PHF20Q9BVI0 1012 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 CYP26B1Q9NR63 512 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 FAM105AQ9NUU6 356 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 VAV3Q9UKW4 847 aa24.33■■□□□ 1.49
SMARCC2-210ENST00000550519 CARNS1A5YM72 827 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 MEIS3P2A8K0S8 358 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 ZC3H11AO75152 810 aaKnown RBP eCLIP24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 CXCL14O95715 111 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 QARSP47897 775 aaKnown RBP24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 ITIH3Q06033 890 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 BMS1Q14692 1282 aaKnown RBP24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 PPP4R3AQ6IN85 833 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 CATSPER4Q7RTX7 472 aa24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 TMEM173Q86WV6 379 aaPredicted RBP24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 SUGP1Q8IWZ8 645 aaKnown RBP24.32■■□□□ 1.48
SMARCC2-210ENST00000550519 VPS52Q8N1B4 723 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms