RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 MTERF2Q49AM1 385 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 MTERF4Q7Z6M4 381 aaKnown RBP4.11□□□□□ -1.75
CCNT1-203ENST00000550457 DNAJC10Q8IXB1 793 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 ULK2Q8IYT8 1036 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 NGEFQ8N5V2 710 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 HIPK4Q8NE63 616 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 RABGGTAQ92696 567 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 DHRS4Q9BTZ2 278 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 SLC52A2Q9HAB3 445 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 GPRC5BQ9NZH0 403 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 MAGEL2Q9UJ55 1249 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 MRPS23Q9Y3D9 190 aaKnown RBP4.11□□□□□ -1.75
CCNT1-203ENST00000550457 ASB1Q9Y576 335 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 B3GALT1Q9Y5Z6 326 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 KDM2BQ8NHM5 1336 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 TEX14Q8IWB6 1497 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 ARHGEF11O15085 1522 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 EHBP1L1Q8N3D4 1523 aa4.11□□□□□ -1.75
CCNT1-203ENST00000550457 A0A1W2PRX2 142 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 FSD2A1L4K1 749 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 GOLGA6L3A6NEY3 463 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 CCDC85CA6NKD9 419 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 CYP27B1O15528 508 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 NCLP19338 710 aaKnown RBP4.1□□□□□ -1.75
CCNT1-203ENST00000550457 APEX1P27695 318 aaKnown RBP4.1□□□□□ -1.75
CCNT1-203ENST00000550457 SDHAP31040 664 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 ADCY7P51828 1080 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 ADAM8P78325 824 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 CRHR2Q13324 411 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 OVCH1Q7RTY7 1134 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 RTN4RL1Q86UN2 441 aaPredicted RBP4.1□□□□□ -1.75
CCNT1-203ENST00000550457 RPUSD2Q8IZ73 545 aaKnown RBP4.1□□□□□ -1.75
CCNT1-203ENST00000550457 GSTCDQ8NEC7 633 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 SLC7A14Q8TBB6 771 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 FOXRED1Q96CU9 486 aaPredicted RBP4.1□□□□□ -1.75
CCNT1-203ENST00000550457 ZG16BQ96DA0 208 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 GPHA2Q96T91 129 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 TTPALQ9BTX7 342 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 CCDC113Q9H0I3 377 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 MAPK8IP3Q9UPT6 1336 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 UHRF1BP1Q6BDS2 1440 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 BICRAQ9NZM4 1560 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 GCC2Q8IWJ2 1684 aa4.1□□□□□ -1.75
CCNT1-203ENST00000550457 C2orf78A6NCI8 922 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 FOXN1O15353 648 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 FRAT2O75474 233 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 PEX11BO96011 259 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 KCNA6P17658 529 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 ANTXR2P58335 489 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 ALDH6A1Q02252 535 aaKnown RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 TOB2Q14106 344 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 TMEM132BQ14DG7 1078 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 ABHD17CQ6PCB6 329 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 CKAP2LQ8IYA6 745 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 ANKRD35Q8N283 1001 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 ERCC4Q92889 916 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 SCLYQ96I15 445 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 NAP1L5Q96NT1 182 aaPredicted RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 PRRX2Q99811 253 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 CELF4Q9BZC1 486 aaKnown RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 UPF2Q9HAU5 1272 aaKnown RBP4.09□□□□□ -1.75
CCNT1-203ENST00000550457 NDOR1Q9UHB4 597 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 VWA7Q9Y334 891 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 USP47Q96K76 1375 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 NINLQ9Y2I6 1382 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 SCAPERQ9BY12 1400 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 SNAPC4Q5SXM2 1469 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 UGGT2Q9NYU1 1516 aa4.09□□□□□ -1.75
CCNT1-203ENST00000550457 RAMP2O60895 175 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 DENND4BO75064 1496 aaPredicted RBP4.08□□□□□ -1.76
CCNT1-203ENST00000550457 RPS6KA4O75676 772 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 STK10O94804 968 aaKnown RBP4.08□□□□□ -1.76
CCNT1-203ENST00000550457 ZC3H6P61129 1189 aaKnown RBP4.08□□□□□ -1.76
CCNT1-203ENST00000550457 GRIN2BQ13224 1484 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 GAPVD1Q14C86 1478 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 FHOD3Q2V2M9 1422 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 KLHDC10Q6PID8 442 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 GAREM2Q75VX8 874 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 SUPT6HQ7KZ85 1726 aaKnown RBP4.08□□□□□ -1.76
CCNT1-203ENST00000550457 CALML6Q8TD86 181 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 RPL10LQ96L21 214 aaKnown RBP4.08□□□□□ -1.76
CCNT1-203ENST00000550457 CRAMP1Q96RY5 1269 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 SLC6A15Q9H2J7 730 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 RRAGDQ9NQL2 400 aaPredicted RBP4.08□□□□□ -1.76
CCNT1-203ENST00000550457 PODXL2Q9NZ53 605 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 MBD5Q9P267 1494 aa4.08□□□□□ -1.76
CCNT1-203ENST00000550457 ARHGEF12Q9NZN5 1544 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 RALGAPBQ86X10 1494 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 BLMP54132 1417 aaPredicted RBP4.07□□□□□ -1.76
CCNT1-203ENST00000550457 PARD3Q8TEW0 1356 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 ANKRD30AQ9BXX3 1397 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 SLC12A8A0AV02 714 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 ZBTB48P10074 688 aaPredicted RBP4.07□□□□□ -1.76
CCNT1-203ENST00000550457 RGS3P49796 1198 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 MAP3K12Q12852 859 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 CNGB1Q14028 1251 aaPredicted RBP4.07□□□□□ -1.76
CCNT1-203ENST00000550457 NBPF8Q3BBV2 869 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 ANKRD53Q8N9V6 530 aa4.07□□□□□ -1.76
CCNT1-203ENST00000550457 NKD2Q969F2 451 aaPredicted RBP4.07□□□□□ -1.76
CCNT1-203ENST00000550457 MIEF2Q96C03 454 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms