RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 GBP7Q8N8V2 638 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 RNF25Q96BH1 459 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 TRIM51Q9BSJ1 452 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 INTS9Q9NV88 658 aaKnown RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 PARP2Q9UGN5 583 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 BAIAP2L1Q9UHR4 511 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 LY75O60449 1722 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 PPP1R12AO14974 1030 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 RGS16O15492 202 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 BUB1BO60566 1050 aaPredicted RBP13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 PDE6CP51160 858 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 CASP5P51878 434 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 SATB1Q01826 763 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 MAPK7Q13164 816 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 BMT2Q1RMZ1 405 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 QRICH1Q2TAL8 776 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 GALNTL6Q49A17 601 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 DCAF12L1Q5VU92 463 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 MFSD5Q6N075 450 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 SYT11Q9BT88 431 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 RASAL2Q9UJF2 1139 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 NR2E1Q9Y466 385 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 PCDHA1Q9Y5I3 950 aa13.82□□□□□ -0.2
CALCOCO1-217ENST00000549935 CALUO43852 315 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 STAT1P42224 750 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 HADHBP55084 474 aaKnown RBP13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 ACCSLQ4AC99 568 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 ARSHQ5FYA8 562 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 PODXLO00592 558 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 KIF3CO14782 793 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 SNX3O60493 162 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 NQO1P15559 274 aaKnown RBP13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 TCEAL1Q15170 157 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 JAMLQ86YT9 394 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 SLC35G2Q8TBE7 412 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 NSMCE1Q8WV22 266 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 SLC35C1Q96A29 364 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 ROPN1BQ9BZX4 212 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 ROPN1Q9HAT0 212 aaPredicted RBP13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 PCYOX1Q9UHG3 505 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 PPP1R9AQ9ULJ8 1098 aa13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
CALCOCO1-217ENST00000549935 RPTORQ8N122 1335 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 C10orf71Q711Q0 1435 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 FAM196BA6NMK8 535 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 MEIS1O00470 390 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 ANP32DO95626 131 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 HLA-DOAP06340 250 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 CCND1P24385 295 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 RPL13P26373 211 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 CHRNA3P32297 505 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 PTGIRP43119 386 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 PSMC6P62333 389 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 LMNB2Q03252 620 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 NFIAQ12857 509 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 SHROOM1Q2M3G4 852 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 PRR16Q569H4 304 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 CDC42EP5Q6NZY7 148 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 TAOK1Q7L7X3 1001 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 LNX1Q8TBB1 728 aaPredicted RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 U2AF1L4Q8WU68 220 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 TCP11Q8WWU5 503 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 STAMBPL1Q96FJ0 436 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 ELAC2Q9BQ52 826 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 SELENOSQ9BQE4 189 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 PLCD4Q9BRC7 762 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 DHX36Q9H2U1 1008 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 NOP53Q9NZM5 478 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 ADAMTSL1Q8N6G6 1762 aa13.8□□□□□ -0.2
CALCOCO1-217ENST00000549935 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 AKAP3O75969 853 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 RARAP10276 462 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 ADRA2BP18089 450 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 PAX7P23759 505 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 HOXD13P35453 343 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 SOX5P35711 763 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 CCNG1P51959 295 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 IRX1P78414 480 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 IFI35P80217 286 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 SLC29A2Q14542 456 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 ZKSCAN8Q15776 578 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 CNGA2Q16280 664 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 NFIL3Q16649 462 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 CATSPER3Q86XQ3 398 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 DNAAF5Q86Y56 855 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 FBXO25Q8TCJ0 367 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 PRMT1Q99873 361 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 COA1Q9GZY4 146 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 AZI2Q9H6S1 392 aa13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 TYW1Q9NV66 732 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 AJAP1Q9UKB5 411 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO1-217ENST00000549935 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms