RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 PCDHB12Q9Y5F1 795 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 XIRP2A4UGR9 3374 aa11.69□□□□□ -0.54
CCDC38-207ENST00000549752 CARNS1A5YM72 827 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 C9IYK1 514 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 TNFRSF10AO00220 468 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 MAFO75444 373 aaPredicted RBP11.68□□□□□ -0.54
CCDC38-207ENST00000549752 LARGE1O95461 756 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 SKIP12755 728 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 SFPQP23246 707 aaKnown RBP eCLIP11.68□□□□□ -0.54
CCDC38-207ENST00000549752 RFC5P40937 340 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 GPC3P51654 580 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 NR5A1Q13285 461 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 CALCRLQ16602 461 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
CCDC38-207ENST00000549752 SPOUT1Q5T280 376 aaKnown RBP11.68□□□□□ -0.54
CCDC38-207ENST00000549752 FAM228AQ86W67 206 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 C4orf19Q8IY42 314 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 ABI1Q8IZP0 508 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 CRIPAKQ8N1N5 446 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 FAM184AQ8NB25 1140 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 TMEM40Q8WWA1 233 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 TCP11Q8WWU5 503 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 SLC39A7Q92504 469 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 C8orf76Q96K31 380 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 PPP1R16BQ96T49 567 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 UHRF1Q96T88 793 aaPredicted RBP11.68□□□□□ -0.54
CCDC38-207ENST00000549752 ADAMTS10Q9H324 1103 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 ZSWIM4Q9H7M6 989 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 CYP26B1Q9NR63 512 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 CHST12Q9NRB3 414 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 GJB4Q9NTQ9 266 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 FAM50BQ9Y247 325 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 KIF3AQ9Y496 699 aa11.68□□□□□ -0.54
CCDC38-207ENST00000549752 IGKV6-21A0A0C4DH24 114 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 FSD2A1L4K1 749 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 BTBD18B2RXH4 712 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 ASAP2O43150 1006 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 ST18O60284 1047 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 NEMFO60524 1076 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 EOMESO95936 686 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 DARSP14868 501 aaKnown RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 POLGP54098 1239 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 ORC2Q13416 577 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 GNL2Q13823 731 aaKnown RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 PAN2Q504Q3 1202 aaKnown RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 NCAPH2Q6IBW4 605 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 HAS1Q92839 578 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 TNFRSF25Q93038 417 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 CEP170P1Q96L14 293 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 CCDC43Q96MW1 224 aaKnown RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 LXNQ9BS40 222 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 FAM117AQ9C073 453 aa11.67□□□□□ -0.54
CCDC38-207ENST00000549752 UBE2ZQ9H832 354 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 SUCLA2Q9P2R7 463 aaPredicted RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 MRPL42Q9Y6G3 142 aaKnown RBP11.67□□□□□ -0.54
CCDC38-207ENST00000549752 TBKBP1A7MCY6 615 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 EML1O00423 815 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 MGEA5O60502 916 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 JAK2O60674 1132 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 BMP1P13497 986 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 IBSPP21815 317 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 YWHABP31946 246 aaKnown RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 RBM25P49756 843 aaKnown RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 FAM189BP81408 668 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 TFF2Q03403 129 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 UBE3AQ05086 875 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 DSC3Q14574 896 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 RABEP1Q15276 862 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 ANO5Q75V66 913 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 RHPN2Q8IUC4 686 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 PTCD2Q8WV60 388 aaKnown RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 PABPC5Q96DU9 382 aaKnown RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 FOXP1Q9H334 677 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 TTC12Q9H892 705 aaPredicted RBP11.66□□□□□ -0.54
CCDC38-207ENST00000549752 PLAGL2Q9UPG8 496 aa11.66□□□□□ -0.54
CCDC38-207ENST00000549752 SPTBN5Q9NRC6 3674 aaKnown RBP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 STBD1O95210 358 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 LINC00271P0C7V0 271 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 LAG3P18627 525 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 RAB27AP51159 221 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 PTGDRQ13258 359 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 PCBP1Q15365 356 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 XKR9Q5GH70 373 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 PLA2G4FQ68DD2 849 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 PDE12Q6L8Q7 609 aaKnown RBP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 PARP9Q8IXQ6 854 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 CEP89Q96ST8 783 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 EPAS1Q99814 870 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 MRPL9Q9BYD2 267 aaKnown RBP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 DHX33Q9H6R0 707 aaKnown RBP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 ANKEF1Q9NU02 776 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 NOL7Q9UMY1 257 aaKnown RBP11.65□□□□□ -0.54
CCDC38-207ENST00000549752 COL4A3BPQ9Y5P4 624 aa11.65□□□□□ -0.54
CCDC38-207ENST00000549752 A0A087WZ62 844 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms