RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ANGEL2Q5VTE6 544 aaKnown RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 TRIM59Q8IWR1 403 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 MAML3Q96JK9 1138 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 UROC1Q96N76 676 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 KATNAL1Q9BW62 490 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 BCO2Q9BYV7 579 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 TWSG1Q9GZX9 223 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 FKBPLQ9UIM3 349 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SIK3Q9Y2K2 1263 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 A0A087X0B3 334 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 EIF3CLB5ME19 914 aaKnown RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ZEB2O60315 1214 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 NMT2O60551 498 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 PFKFB1P16118 471 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 CCNE1P24864 410 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 GPC3P51654 580 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF135P52742 658 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ITGB3BPQ13352 177 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 NAA30Q147X3 362 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 KIF22Q14807 665 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SAFBQ15424 915 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 NFKBIBQ15653 356 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 BRDTQ58F21 947 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 SLFN11Q7Z7L1 901 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 IRF2BP1Q8IU81 584 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 BEST2Q8NFU1 509 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 VCPIP1Q96JH7 1222 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 EIF3CQ99613 913 aaKnown RBP5.43□□□□□ -1.54
SCAF11-212ENST00000549162 FEZ1Q99689 392 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ABHD16BQ9H3Z7 469 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 CNTN3Q9P232 1028 aa5.43□□□□□ -1.54
SCAF11-212ENST00000549162 ANO9A1A5B4 782 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SMTNL1A8MU46 457 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 WDR64B1ANS9 1081 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 DGAT1O75907 488 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SNAI1O95863 264 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 EPS15P42566 896 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ZSCAN23Q3MJ62 389 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 EPC2Q52LR7 807 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 XKR3Q5GH77 459 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 IER5Q5VY09 327 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF449Q6P9G9 518 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 DAW1Q8N136 415 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 LRRC47Q8N1G4 583 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 NIPA2Q8N8Q9 360 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ERMNQ8TAM6 284 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 DYNLL2Q96FJ2 89 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 RPAP3Q9H6T3 665 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 PSTPIP2Q9H939 334 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 A1CFQ9NQ94 594 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 MAGEC2Q9UBF1 373 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 DOCK4Q8N1I0 1966 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SMCO2A6NFE2 343 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 FAM86B1E9PN63 330 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TBC1D4O60343 1298 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 JAK2O60674 1132 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 EFCAB14O75071 495 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 PPFIA4O75335 1185 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 FRAT2O75474 233 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 C22orf31O95567 290 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 FAM86B2P0C5J1 330 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 PSMD6Q15008 389 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ARHGEF6Q15052 776 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 CLUL1Q15846 466 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 MIIPQ5JXC2 388 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 EMC10Q5UCC4 262 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SLC51AQ86UW1 340 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TATDN2Q93075 761 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF622Q969S3 477 aaKnown RBP eCLIP5.42□□□□□ -1.548e-7■■□□□ 12
SCAF11-212ENST00000549162 CCDC34Q96HJ3 373 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 YTHDC1Q96MU7 727 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TMEM175Q9BSA9 504 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TMEM39BQ9GZU3 492 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 UBN1Q9NPG3 1134 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TYW1Q9NV66 732 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ANO10Q9NW15 660 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 GDAP2Q9NXN4 497 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SEC63Q9UGP8 760 aaKnown RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ZKSCAN5Q9Y2L8 839 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TRIP11Q15643 1979 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 EGFRP00533 1210 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 PLS3P13797 630 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ATP4AP20648 1035 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 CCDC173Q0VFZ6 552 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 SMARCB1Q12824 385 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ZNF397Q8NF99 534 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 GPRC5AQ8NFJ5 357 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 DTX3LQ8TDB6 740 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ATP8B4Q8TF62 1192 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 PIGSQ96S52 555 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TEKT3Q9BXF9 490 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 FAM126AQ9BYI3 521 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 FAM53CQ9NYF3 392 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 TNFSF13BQ9Y275 285 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 COL27A1Q8IZC6 1860 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-212ENST00000549162 KIAA0355O15063 1070 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 GPR32O75388 356 aa5.42□□□□□ -1.54
SCAF11-212ENST00000549162 ARIH2O95376 493 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms