RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 PADI3Q9ULW8 664 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 ST3GAL5Q9UNP4 418 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 COL4A3BPQ9Y5P4 624 aa10.66□□□□□ -0.7
RAB5B-205ENST00000549034 ARID2Q68CP9 1835 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-205ENST00000549034 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-205ENST00000549034 SFI1A8K8P3 1242 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 ENPP3O14638 875 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 FGFR4P22455 802 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 EIF4BP23588 611 aaKnown RBP10.65□□□□□ -0.7
RAB5B-205ENST00000549034 ARL2P36404 184 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 KCNJ6P48051 423 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 PAK2Q13177 524 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 TFDP1Q14186 410 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 AXDND1Q5T1B0 1012 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-205ENST00000549034 SHC4Q6S5L8 630 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 C1orf186Q6ZWK4 172 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 ZNF410Q86VK4 478 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 PDILTQ8N807 584 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 RNF149Q8NC42 400 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 ASAP3Q8TDY4 903 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 TMEM40Q8WWA1 233 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 RAD54LQ92698 747 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 APBB2Q92870 758 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 GDPD2Q9HCC8 539 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 BLOC1S4Q9NUP1 217 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 CXXC1Q9P0U4 656 aaPredicted RBP10.65□□□□□ -0.7
RAB5B-205ENST00000549034 SLC4A7Q9Y6M7 1214 aa10.65□□□□□ -0.7
RAB5B-205ENST00000549034 TANC1Q9C0D5 1861 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 NPHP3-ACAD11A0A0J9YXS1 232 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 A0A1W2PPC1 479 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 BAIAP3O94812 1187 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 KRT18P05783 430 aaKnown RBP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 DARSP14868 501 aaKnown RBP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 ZSCAN20P17040 1043 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 IBSPP21815 317 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 GLRA2P23416 452 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 STAT6P42226 847 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 SLC12A3P55017 1021 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 RAD51AP2Q09MP3 1159 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 ADALQ6DHV7 355 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 CCDC73Q6ZRK6 1079 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 SV2BQ7L1I2 683 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 SRGAP1Q7Z6B7 1085 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 RTN4RL1Q86UN2 441 aaPredicted RBP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 GPBP1Q86WP2 473 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 LARP4BQ92615 738 aaKnown RBP10.64□□□□□ -0.71
RAB5B-205ENST00000549034 IFT74Q96LB3 600 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 RUSC1Q9BVN2 902 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 ERVK-5Q9HDB9 667 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 MYH11P35749 1972 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 CEP290O15078 2479 aa10.64□□□□□ -0.71
RAB5B-205ENST00000549034 A0A087X0B3 334 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 LRRIQ4A6NIV6 560 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 CCDC169A6NNP5 214 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 GRXCR1A8MXD5 290 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 INO80B-WBP1J3KQ70 363 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 EFCAB14O75071 495 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 HIP1RO75146 1068 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 UPP2O95045 317 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 AMHP03971 560 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 PEX3P56589 373 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 CAPSQ13938 189 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 ARSHQ5FYA8 562 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 HABP4Q5JVS0 413 aaKnown RBP10.63□□□□□ -0.71
RAB5B-205ENST00000549034 RASIP1Q5U651 963 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 DEPTORQ8TB45 409 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 LRRC15Q8TF66 581 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 KIFAP3Q92845 792 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 DHX58Q96C10 678 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 ZBED2Q9BTP6 218 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 FTHL17Q9BXU8 183 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 ZHX3Q9H4I2 956 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 IFT122Q9HBG6 1241 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 SIP14410 1827 aa10.63□□□□□ -0.71
RAB5B-205ENST00000549034 A0A1B0GVL5 298 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 DENND3A2RUS2 1198 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 GOLGA6L4A6NEF3 574 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 POLR2DO15514 142 aaKnown RBP10.62□□□□□ -0.71
RAB5B-205ENST00000549034 ATP2A2P16615 1042 aaKnown RBP10.62□□□□□ -0.71
RAB5B-205ENST00000549034 LIG1P18858 919 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 SFPQP23246 707 aaKnown RBP eCLIP10.62□□□□□ -0.71
RAB5B-205ENST00000549034 CMA1P23946 247 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 GUCY2CP25092 1073 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 PHKA2P46019 1235 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 PTENP60484 403 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 WDR5P61964 334 aaKnown RBP10.62□□□□□ -0.71
RAB5B-205ENST00000549034 DEFB103AP81534 67 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 POU5F1BQ06416 359 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 NCBP1Q09161 790 aaKnown RBP10.62□□□□□ -0.71
RAB5B-205ENST00000549034 GIT2Q14161 759 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 PPP2R5AQ15172 486 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 RESP18Q5W5W9 173 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 DYMQ7RTS9 669 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 CATSPER4Q7RTX7 472 aa10.62□□□□□ -0.71
RAB5B-205ENST00000549034 TMCO2Q7Z6W1 182 aaPredicted RBP10.62□□□□□ -0.71
RAB5B-205ENST00000549034 MYOCDQ8IZQ8 938 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms