RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 USP17L11C9JVI0 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L18D6R9N7 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L22D6RA61 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L17D6RBQ6 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L19D6RCP7 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L20D6RJB6 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 KIAA0391O15091 583 aaKnown RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 CLIC2O15247 247 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 UFL1O94874 794 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 RSPH10BP0C881 870 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 AKR1B1P15121 316 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 PPATQ06203 517 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 KCNA1Q09470 495 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L24Q0WX57 530 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 PLS1Q14651 629 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 KIAA1755Q5JYT7 1200 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L6PQ6QN14 398 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 C15orf52Q6ZUT6 534 aaKnown RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 HOMEZQ8IX15 550 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 ALG3Q92685 438 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 CRAMP1Q96RY5 1269 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 IKZF4Q9H2S9 585 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 PSTPIP2Q9H939 334 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 ABCF3Q9NUQ8 709 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 INTS9Q9NV88 658 aaKnown RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 TMOD4Q9NZQ9 345 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 RGS17Q9UGC6 210 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 GPR75-ASB3A0A0A6YYF3 556 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 CCDC169A6NNP5 214 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 CALUO43852 315 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 GSTA1P08263 222 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 VIMP08670 466 aaKnown RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 KRT13P13646 458 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 GBP2P32456 591 aaPredicted RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 SLCO1A2P46721 670 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 RHBDL3P58872 404 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 ZNF543Q08ER8 600 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 EPS8L3Q8TE67 593 aaKnown RBP14.86□□□□□ -0.03
HDAC7-228ENST00000548938 CARD9Q9H257 536 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 KCNMB3Q9NPA1 279 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 SAMD15Q9P1V8 674 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 KCNG1Q9UIX4 513 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 AGAP1Q9UPQ3 857 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 PCDHB13Q9Y5F0 798 aa14.86□□□□□ -0.03
HDAC7-228ENST00000548938 USP17L10C9JJH3 530 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 PDXKO00764 312 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 TMEM253P0C7T8 217 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 PAX7P23759 505 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 STAT1P42224 750 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 MAPK7Q13164 816 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 TRPM8Q7Z2W7 1104 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 CATSPER3Q86XQ3 398 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 CTNNBL1Q8WYA6 563 aaPredicted RBP14.85□□□□□ -0.03
HDAC7-228ENST00000548938 C18orf8Q96DM3 657 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 SEMA4AQ9H3S1 761 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 GRHL1Q9NZI5 618 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 MYO1EQ12965 1108 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 DPP8Q6V1X1 898 aaPredicted RBP14.85□□□□□ -0.03
HDAC7-228ENST00000548938 ZNF804AQ7Z570 1209 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 TYW1Q9NV66 732 aaKnown RBP14.85□□□□□ -0.03
HDAC7-228ENST00000548938 TAS2R14Q9NYV8 317 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 GGT7Q9UJ14 662 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 GGA1Q9UJY5 639 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 TRPC6Q9Y210 931 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
HDAC7-228ENST00000548938 CD2APQ9Y5K6 639 aa14.85□□□□□ -0.03
HDAC7-228ENST00000548938 FAM187AA6NFU0 413 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 FGFR4P22455 802 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 ATP2B4P23634 1241 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 SOX5P35711 763 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 CRYMQ14894 314 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 PALB2Q86YC2 1186 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 METTL14Q9HCE5 456 aaKnown RBP14.84□□□□□ -0.03
HDAC7-228ENST00000548938 POLLQ9UGP5 575 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 COG5Q9UP83 839 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 L3MBTL1Q9Y468 752 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 RPL21P46778 160 aaKnown RBP14.84□□□□□ -0.03
HDAC7-228ENST00000548938 DHX34Q14147 1143 aaKnown RBP14.84□□□□□ -0.03
HDAC7-228ENST00000548938 NAA25Q14CX7 972 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 CCDC38Q502W7 563 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 NAP1L3Q99457 506 aaPredicted RBP14.84□□□□□ -0.03
HDAC7-228ENST00000548938 CCDC113Q9H0I3 377 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 THAP2Q9H0W7 228 aa14.84□□□□□ -0.03
HDAC7-228ENST00000548938 PLIN4Q96Q06 1357 aa14.83□□□□□ -0.03
HDAC7-228ENST00000548938 A0A1B0GUA9 196 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 SLC16A3O15427 465 aaKnown RBP14.83□□□□□ -0.04
HDAC7-228ENST00000548938 GCNT3O95395 438 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 MMP10P09238 476 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 VCAM1P19320 739 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 LMNB1P20700 586 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 DRAP1Q14919 205 aaPredicted RBP14.83□□□□□ -0.04
HDAC7-228ENST00000548938 POTEAQ6S8J7 498 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 KCTD1Q719H9 257 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 FAXDC2Q96IV6 333 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 CD209Q9NNX6 404 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 SEPT11Q9NVA2 429 aaKnown RBP14.83□□□□□ -0.04
HDAC7-228ENST00000548938 DIS3Q9Y2L1 958 aaKnown RBP14.83□□□□□ -0.04
HDAC7-228ENST00000548938 UBOX5O94941 541 aa14.83□□□□□ -0.04
HDAC7-228ENST00000548938 AGTP01019 485 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms