RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	MIEF2	Q96C03	454 aa		5.59	□□□□□ -1.51
RPAP3-205	ENST00000548211	NCOA5	Q9HCD5	579 aa	Known RBP	5.59	□□□□□ -1.51
RPAP3-205	ENST00000548211	SNAPC4	Q5SXM2	1469 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	GOLGA8B	A8MQT2	603 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	CYP27B1	O15528	508 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	FAM20B	O75063	409 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	NPTXR	O95502	500 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	APP	P05067	770 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	PTX3	P26022	381 aa	Predicted RBP	5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	NANOS3	P60323	173 aa	Known RBP	5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	ELAVL1	Q15717	326 aa	Known RBP	5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	FAM111B	Q6SJ93	734 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	ANKRD35	Q8N283	1001 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	THAP3	Q8WTV1	239 aa	Predicted RBP	5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	PGBD4	Q96DM1	585 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	MAML3	Q96JK9	1138 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	DNAI1	Q9UI46	699 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	DMRT1	Q9Y5R6	373 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	SYNJ2	O15056	1496 aa		5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	POLA1	P09884	1462 aa	Predicted RBP	5.58	□□□□□ -1.52
RPAP3-205	ENST00000548211	TRAF5	O00463	557 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	ROM1	Q03395	351 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	CNGB1	Q14028	1251 aa	Predicted RBP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	TOB2	Q14106	344 aa	Predicted RBP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	ZNF460	Q14592	562 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	DGKD	Q16760	1214 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	SLFN12L	Q6IEE8	588 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	MRGPRG	Q86SM5	289 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	CLEC14A	Q86T13	490 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	ZNF575	Q86XF7	245 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	RPUSD2	Q8IZ73	545 aa	Known RBP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	PMFBP1	Q8TBY8	1022 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	LPP	Q93052	612 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	GFM2	Q969S9	779 aa	Known RBP	5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	TTPAL	Q9BTX7	342 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	IL23A	Q9NPF7	189 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	SAMD15	Q9P1V8	674 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	GRIN2B	Q13224	1484 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	SOGA1	O94964	1423 aa		5.57	□□□□□ -1.52
RPAP3-205	ENST00000548211	TDRD9	Q8NDG6	1382 aa	Known RBP	5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	XDH	P47989	1333 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	PTPDC1	A2A3K4	754 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	TOX4	O94842	621 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	FNTB	P49356	437 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	MAN2A2	P49641	1150 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	RABGGTB	P53611	331 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	SESN2	P58004	480 aa	Predicted RBP	5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	ARHGAP44	Q17R89	818 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	C2orf27A	Q580R0	203 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	PRAMEF9	Q5VWM5	478 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	GSPT2	Q8IYD1	628 aa	Known RBP	5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	ULK2	Q8IYT8	1036 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	PLA2G15	Q8NCC3	412 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	C16orf92	Q96LL3	132 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	GPR87	Q9BY21	358 aa		5.56	□□□□□ -1.52
RPAP3-205	ENST00000548211	KIF13A	Q9H1H9	1805 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	CCDC163	A0A0D9SF12	145 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	UBA6	A0AVT1	1052 aa	Predicted RBP	5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	STC2	O76061	302 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	SLC9A1	P19634	815 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	PURA	Q00577	322 aa	Known RBP	5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	COL10A1	Q03692	680 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	FSTL1	Q12841	308 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	MYBPC3	Q14896	1274 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	TTC38	Q5R3I4	469 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	C1QL3	Q5VWW1	255 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	DDX53	Q86TM3	631 aa	Known RBP	5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	KIAA1958	Q8N8K9	716 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	CHST14	Q8NCH0	376 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	DYDC2	Q96IM9	177 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	WDR92	Q96MX6	357 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	TUBGCP5	Q96RT8	1024 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	TCF25	Q9BQ70	676 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	NRDE2	Q9H7Z3	1164 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	KCMF1	Q9P0J7	381 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	NCDN	Q9UBB6	729 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	TNPO3	Q9Y5L0	923 aa	Known RBP	5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	CCDC88B	A6NC98	1476 aa		5.55	□□□□□ -1.52
RPAP3-205	ENST00000548211	KLRG2	A4D1S0	409 aa	Predicted RBP	5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	PLD2	O14939	933 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	RAMP2	O60895	175 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	DNAJC8	O75937	253 aa	Predicted RBP	5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	FKBP15	Q5T1M5	1219 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	UNQ6494/PRO21346	Q6UXR6	183 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	DNAJC10	Q8IXB1	793 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	MB21D1	Q8N884	522 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	MKL1	Q969V6	931 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	E2F7	Q96AV8	911 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	ARMC5	Q96C12	935 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	ZG16B	Q96DA0	208 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	PCIF1	Q9H4Z3	704 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	ACSS2	Q9NR19	701 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	POLR3B	Q9NW08	1133 aa	Predicted RBP	5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	RCAN3	Q9UKA8	241 aa		5.54	□□□□□ -1.52
RPAP3-205	ENST00000548211	RAD54L2	Q9Y4B4	1467 aa		5.53	□□□□□ -1.52
RPAP3-205	ENST00000548211	FOXN1	O15353	648 aa		5.53	□□□□□ -1.52
RPAP3-205	ENST00000548211	PEX11B	O96011	259 aa		5.53	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms