RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 USP34Q70CQ2 3546 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 PROB1E7EW31 1015 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 H0Y858 1186 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 BRD1O95696 1058 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 ZDHHC14Q8IZN3 488 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 PLCD3Q8N3E9 789 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 TMEM87AQ8NBN3 555 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 GCOM2Q9BZD3 368 aaPredicted RBP22.59■■□□□ 1.21
GATC-202ENST00000548171 CDH22Q9UJ99 828 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 USTQ9Y2C2 406 aa22.59■■□□□ 1.21
GATC-202ENST00000548171 PTPRZ1P23471 2315 aaPredicted RBP22.59■■□□□ 1.21
GATC-202ENST00000548171 ADAMTS3O15072 1205 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 GAS7O60861 476 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 CXCL14O95715 111 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 SKIP12755 728 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 CA8P35219 290 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 USP11P51784 963 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 POLGP54098 1239 aaPredicted RBP22.58■■□□□ 1.21
GATC-202ENST00000548171 ATAT1Q5SQI0 421 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 KIAA1841Q6NSI8 718 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 VPS52Q8N1B4 723 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 TDRD5Q8NAT2 981 aaKnown RBP22.58■■□□□ 1.21
GATC-202ENST00000548171 CCDC148Q8NFR7 591 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 ZNF668Q96K58 619 aaPredicted RBP22.58■■□□□ 1.21
GATC-202ENST00000548171 NID2Q14112 1375 aa22.58■■□□□ 1.21
GATC-202ENST00000548171 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.57■■□□□ 1.2
GATC-202ENST00000548171 MSH4O15457 936 aa22.57■■□□□ 1.2
GATC-202ENST00000548171 SFPQP23246 707 aaKnown RBP eCLIP22.57■■□□□ 1.2
GATC-202ENST00000548171 IRX6P78412 446 aaPredicted RBP22.57■■□□□ 1.2
GATC-202ENST00000548171 AKAP17AQ02040 695 aaKnown RBP22.57■■□□□ 1.2
GATC-202ENST00000548171 TARBP2Q15633 366 aaKnown RBP22.57■■□□□ 1.2
GATC-202ENST00000548171 DDX53Q86TM3 631 aaKnown RBP22.57■■□□□ 1.2
GATC-202ENST00000548171 RDM1Q8NG50 284 aa22.57■■□□□ 1.2
GATC-202ENST00000548171 SLC5A5Q92911 643 aa22.57■■□□□ 1.2
GATC-202ENST00000548171 CCDC136Q96JN2 1154 aa22.57■■□□□ 1.2
GATC-202ENST00000548171 ZBP1Q9H171 429 aa22.57■■□□□ 1.2
GATC-202ENST00000548171 RIF1Q5UIP0 2472 aaKnown RBP22.57■■□□□ 1.2
GATC-202ENST00000548171 FAM186AA6NE01 2351 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 NT5C1B-RDH14C9J2C7 533 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 CTSAP10619 480 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 FGFR4P22455 802 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 PHKA2P46019 1235 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 DNM2P50570 870 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 UGCGQ16739 394 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 RARS2Q5T160 578 aaKnown RBP22.56■■□□□ 1.2
GATC-202ENST00000548171 LRCH2Q5VUJ6 765 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 GLB1LQ6UWU2 654 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 TEKT3Q9BXF9 490 aa22.56■■□□□ 1.2
GATC-202ENST00000548171 NIFKQ9BYG3 293 aaKnown RBP22.56■■□□□ 1.2
GATC-202ENST00000548171 INO80BQ9C086 356 aaPredicted RBP22.56■■□□□ 1.2
GATC-202ENST00000548171 DBR1Q9UK59 544 aaKnown RBP22.56■■□□□ 1.2
GATC-202ENST00000548171 SPTBN4Q9H254 2564 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 CHMP2AO43633 222 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 ZC3H11AO75152 810 aaKnown RBP eCLIP22.55■■□□□ 1.2
GATC-202ENST00000548171 XKR3Q5GH77 459 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 TWF2Q6IBS0 349 aaKnown RBP22.55■■□□□ 1.2
GATC-202ENST00000548171 PPFIBP1Q86W92 1011 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 TMEM105Q8N8V8 129 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 IGSF21Q96ID5 467 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 RNF26Q9BY78 433 aaPredicted RBP22.55■■□□□ 1.2
GATC-202ENST00000548171 STK39Q9UEW8 545 aa22.55■■□□□ 1.2
GATC-202ENST00000548171 IGKV6-21A0A0C4DH24 114 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 NBL1P41271 181 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 RAB27AP51159 221 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 ASTLQ6HA08 431 aaPredicted RBP22.54■■□□□ 1.2
GATC-202ENST00000548171 Q6ZUG5 572 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 ZNF410Q86VK4 478 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 FBXL16Q8N461 479 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 SLC22A17Q8WUG5 538 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 BRF1Q92994 677 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 UNC45AQ9H3U1 944 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 TBC1D13Q9NVG8 400 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 LIMD1Q9UGP4 676 aa22.54■■□□□ 1.2
GATC-202ENST00000548171 SEPT9Q9UHD8 586 aaPredicted RBP22.54■■□□□ 1.2
GATC-202ENST00000548171 C2orf16Q68DN1 1984 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 ZNF623O75123 536 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 CSDE1O75534 798 aaKnown RBP22.53■■□□□ 1.2
GATC-202ENST00000548171 WEE2P0C1S8 567 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 EPCAMP16422 314 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 CLCN5P51795 746 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 DRP2Q13474 957 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 NOMO2Q5JPE7 1267 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 TMEM173Q86WV6 379 aaPredicted RBP22.53■■□□□ 1.2
GATC-202ENST00000548171 C12orf76Q8N812 135 aaPredicted RBP22.53■■□□□ 1.2
GATC-202ENST00000548171 PHKBQ93100 1093 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 C22orf23Q9BZE7 217 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 MFSD1Q9H3U5 465 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 SH3GLB2Q9NR46 395 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 CYP26B1Q9NR63 512 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 CFAP54Q96N23 3096 aa22.53■■□□□ 1.2
GATC-202ENST00000548171 A0A087WZ62 844 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 PSMD10O75832 226 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 ASGR2P07307 311 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 GALTP07902 379 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 FOXK2Q01167 660 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 MTERF2Q49AM1 385 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 Q4G0T1 1027 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 MIER3Q7Z3K6 550 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 CABP7Q86V35 215 aa22.52■■□□□ 1.2
GATC-202ENST00000548171 ACSF2Q96CM8 615 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms