RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 ZSCAN20P17040 1043 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 MUTP22033 750 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 ERVK-21P61565 698 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 BTG3Q14201 252 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 PDIA5Q14554 519 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 DSC3Q14574 896 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 SF3A1Q15459 793 aaKnown RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 ZRSR1Q15695 479 aaKnown RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 PAN2Q504Q3 1202 aaKnown RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 ASAP3Q8TDY4 903 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 INO80BQ9C086 356 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 IFT122Q9HBG6 1241 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 GPRC5CQ9NQ84 441 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
RAB5C-204ENST00000547517 PCDHB7Q9Y5E2 793 aa13.15□□□□□ -0.3
RAB5C-204ENST00000547517 BMP15O95972 392 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 PHKA2P46019 1235 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 CAPSQ13938 189 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 TFDP1Q14186 410 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-204ENST00000547517 FAM102BQ5T8I3 360 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 ARL6IP4Q66PJ3 421 aaKnown RBP13.14□□□□□ -0.31
RAB5C-204ENST00000547517 FAM173BQ6P4H8 233 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 PADI6Q6TGC4 694 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 FAM43BQ6ZT52 329 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-204ENST00000547517 CRIPAKQ8N1N5 446 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 FIBCD1Q8N539 461 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 SPRYD3Q8NCJ5 442 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 FBXO22Q8NEZ5 403 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-204ENST00000547517 MMTAG2Q9BU76 263 aaKnown RBP13.14□□□□□ -0.31
RAB5C-204ENST00000547517 BHMT2Q9H2M3 363 aa13.14□□□□□ -0.31
RAB5C-204ENST00000547517 NLRC5Q86WI3 1866 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 ASAP2O43150 1006 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 ERLIN2O94905 339 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 FGFR1P11362 822 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 GLRA2P23416 452 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 CTNNB1P35222 781 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 ARL2P36404 184 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 GRB10Q13322 594 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 EPC2Q52LR7 807 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
RAB5C-204ENST00000547517 SRGAP1Q7Z6B7 1085 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 CMTR2Q8IYT2 770 aaKnown RBP13.13□□□□□ -0.31
RAB5C-204ENST00000547517 MCPH1Q8NEM0 835 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 PPM1EQ8WY54 764 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 MINDY3Q9H8M7 445 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-204ENST00000547517 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 DACT1Q9NYF0 836 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
RAB5C-204ENST00000547517 MRPL42Q9Y6G3 142 aaKnown RBP13.13□□□□□ -0.31
RAB5C-204ENST00000547517 RALGAPA2Q2PPJ7 1873 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 LRRIQ4A6NIV6 560 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 E9PMD0 336 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 INO80B-WBP1J3KQ70 363 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 GTPBP6O43824 516 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-204ENST00000547517 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
RAB5C-204ENST00000547517 GRIN1Q05586 938 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-204ENST00000547517 KCNK18Q7Z418 384 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 CABP7Q86V35 215 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 TMEM192Q8IY95 271 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-204ENST00000547517 CDK5RAP3Q96JB5 506 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 PLIN2Q99541 437 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 ELAC1Q9H777 363 aaKnown RBP13.12□□□□□ -0.31
RAB5C-204ENST00000547517 CHST12Q9NRB3 414 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 DNM3Q9UQ16 869 aa13.12□□□□□ -0.31
RAB5C-204ENST00000547517 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 LPXNO60711 386 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 EYA4O95677 639 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 ATF7P17544 494 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-204ENST00000547517 CYP11B2P19099 503 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 PTENP60484 403 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 FAM189BP81408 668 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 MBTD1Q05BQ5 628 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-204ENST00000547517 ABI1Q8IZP0 508 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 BSNDQ8WZ55 320 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 AK8Q96MA6 479 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 PNMA5Q96PV4 448 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 ZSCAN16Q9H4T2 348 aaPredicted RBP13.11□□□□□ -0.31
RAB5C-204ENST00000547517 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 RWDD3Q9Y3V2 267 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 MTCH2Q9Y6C9 303 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 MYO9BQ13459 2157 aa13.11□□□□□ -0.31
RAB5C-204ENST00000547517 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 A0A0U1RQF3 1178 aa13.1□□□□□ -0.31
RAB5C-204ENST00000547517 HOXA2O43364 376 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms