RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 A0A087WZ62 844 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 CSF2RAP15509 400 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 CACNB1Q02641 598 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 SNW1Q13573 536 aaKnown RBP25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 PPP2R5AQ15172 486 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 FBXO47Q5MNV8 452 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 KRBA2Q6ZNG9 492 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 FDXACB1Q9BRP7 624 aaPredicted RBP25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 C17orf75Q9HAS0 396 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 LMBRD1Q9NUN5 540 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 SQORQ9Y6N5 450 aa25.65■■□□□ 1.7
SMARCD1-203ENST00000547247 SFI1A8K8P3 1242 aa25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 LIG1P18858 919 aa25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 AFMP43652 599 aa25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 POU5F1BQ06416 359 aa25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 CAPSQ13938 189 aa25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 USP38Q8NB14 1042 aa25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 GCOM2Q9BZD3 368 aaPredicted RBP25.64■■□□□ 1.69
SMARCD1-203ENST00000547247 NBNO60934 754 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 TBCAO75347 108 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 FAM13AO94988 1023 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 EIF4BP23588 611 aaKnown RBP25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 MDM2Q00987 491 aaPredicted RBP25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 FPGSQ05932 587 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 PPIGQ13427 754 aaKnown RBP eCLIP25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 GPNMBQ14956 572 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 BSNDQ8WZ55 320 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 DNAJC19Q96DA6 116 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 PAGE5Q96GU1 130 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 CCDC34Q96HJ3 373 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 TRIM9Q9C026 710 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 IFT122Q9HBG6 1241 aa25.63■■□□□ 1.69
SMARCD1-203ENST00000547247 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 LRRIQ4A6NIV6 560 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 NR1I2O75469 434 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 GHRP10912 638 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 NAMPTP43490 491 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 PHKA2P46019 1235 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 LPIN1Q14693 890 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 KANK3Q6NY19 840 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 DEFB128Q7Z7B8 93 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 RPUSD2Q8IZ73 545 aaKnown RBP25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 TMEM40Q8WWA1 233 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 OSBPL7Q9BZF2 842 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 INO80BQ9C086 356 aaPredicted RBP25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 ZHX3Q9H4I2 956 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 LARSQ9P2J5 1176 aaKnown RBP25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 KCNG1Q9UIX4 513 aa25.62■■□□□ 1.69
SMARCD1-203ENST00000547247 PLS3P13797 630 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 DARSP14868 501 aaKnown RBP25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 MAGEA10P43363 369 aaPredicted RBP25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 ZNF131P52739 623 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 PEX3P56589 373 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 PTENP60484 403 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 DMP1Q13316 513 aaPredicted RBP25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 TSHZ1Q6ZSZ6 1077 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 C7orf25Q9BPX7 421 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 PARVGQ9HBI0 331 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 SIP14410 1827 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 RPS6KA5O75582 802 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 CXCL10P02778 98 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 PFKMP08237 780 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 CNNM4Q6P4Q7 775 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 SRGAP1Q7Z6B7 1085 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 GRAMD1CQ8IYS0 662 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 TIGD1Q96MW7 591 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 NFKBIZQ9BYH8 718 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 IL23AQ9NPF7 189 aa25.61■■□□□ 1.69
SMARCD1-203ENST00000547247 SCN5AQ14524 2016 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 KINO60870 393 aaKnown RBP25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 IDEP14735 1019 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 NPTX2P47972 431 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 ODR4Q5SWX8 454 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 CHRDL2Q6WN34 429 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 IFNLR1Q8IU57 520 aaPredicted RBP25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 MYCT1Q8N699 235 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 DEPTORQ8TB45 409 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 BLZF1Q9H2G9 400 aa25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 NOC2LQ9Y3T9 749 aaKnown RBP25.6■■□□□ 1.69
SMARCD1-203ENST00000547247 MYH11P35749 1972 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 CCDC169A6NNP5 214 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 MYL1P05976 194 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 SMTNP53814 917 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 ASIC1P78348 528 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 CUL4BQ13620 913 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 PLEKHG4Q58EX7 1191 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 ZBTB8OSQ8IWT0 167 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 SPIRE2Q8WWL2 714 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 NTPCRQ9BSD7 190 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 IFIH1Q9BYX4 1025 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 C2orf40Q9H1Z8 148 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 AGO3Q9H9G7 860 aaKnown RBP25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 KMT5AQ9NQR1 393 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 DACT1Q9NYF0 836 aa25.59■■□□□ 1.69
SMARCD1-203ENST00000547247 GPR182O15218 404 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 CSDE1O75534 798 aaKnown RBP25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 GAP43P17677 238 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 CASP1P29466 404 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 CD52P31358 61 aa25.58■■□□□ 1.69
SMARCD1-203ENST00000547247 PAK2Q13177 524 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms