RNA–Protein interactions for RNA: ENST00000547194.1

HCFC2-203, Transcript of host cell factor C2, humanhuman

TSL 3

Gene HCFC2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-203ENST00000547194 FOXL1Q12952 345 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 TMEM132BQ14DG7 1078 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 EIF4HQ15056 248 aaKnown RBP4.25□□□□□ -1.73
HCFC2-203ENST00000547194 CFAP100Q494V2 611 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 CATSPEREQ5SY80 951 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 GORABQ5T7V8 394 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 TMEM200BQ69YZ2 307 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 CC2D1AQ6P1N0 951 aaPredicted RBP4.25□□□□□ -1.73
HCFC2-203ENST00000547194 CNNM4Q6P4Q7 775 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 Q6ZPA2 131 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 UBE2R2Q712K3 238 aaPredicted RBP4.25□□□□□ -1.73
HCFC2-203ENST00000547194 GAREM2Q75VX8 874 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 OTOP2Q7RTS6 562 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 KIF18BQ86Y91 864 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 RPUSD2Q8IZ73 545 aaKnown RBP4.25□□□□□ -1.73
HCFC2-203ENST00000547194 CHST14Q8NCH0 376 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 CALML6Q8TD86 181 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 RIOX1Q9H6W3 641 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 ZNHIT2Q9UHR6 403 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 SLC30A1Q9Y6M5 507 aa4.25□□□□□ -1.73
HCFC2-203ENST00000547194 A0A0G2JNJ9 132 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 PRAMEF22A3QJZ6 481 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 TMEM191CA6NGB0 347 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 GOLGA6L22H0YM25 854 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 KPNA6O60684 536 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 ZNF37AP17032 561 aaPredicted RBP4.24□□□□□ -1.73
HCFC2-203ENST00000547194 FBLP22087 321 aaKnown RBP4.24□□□□□ -1.73
HCFC2-203ENST00000547194 FNTBP49356 437 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 CRHR2Q13324 411 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 NFYCQ13952 458 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 PCBP1Q15365 356 aaKnown RBP eCLIP4.24□□□□□ -1.73
HCFC2-203ENST00000547194 CREB3L3Q68CJ9 461 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 TRIM68Q6AZZ1 485 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 GRAMD4Q6IC98 578 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 THNSL2Q86YJ6 484 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 PPM1KQ8N3J5 372 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 ZNF764Q96H86 408 aaPredicted RBP4.24□□□□□ -1.73
HCFC2-203ENST00000547194 SLKQ9H2G2 1235 aaPredicted RBP4.24□□□□□ -1.73
HCFC2-203ENST00000547194 MSL2Q9HCI7 577 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 CABP5Q9NP86 173 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 CEP72Q9P209 647 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 B4GALT6Q9UBX8 382 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 Q9UFV3 132 aa4.24□□□□□ -1.73
HCFC2-203ENST00000547194 CAPN14A8MX76 684 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 HMGB1P1B2RPK0 211 aaPredicted RBP4.23□□□□□ -1.73
HCFC2-203ENST00000547194 DVL2O14641 736 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 PDE8AO60658 829 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 MYCLP1P12525 358 aaPredicted RBP4.23□□□□□ -1.73
HCFC2-203ENST00000547194 NEK4P51957 841 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 ALDH6A1Q02252 535 aaKnown RBP4.23□□□□□ -1.73
HCFC2-203ENST00000547194 MAP3K12Q12852 859 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 MOGSQ13724 837 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 SEPT7Q16181 437 aaKnown RBP4.23□□□□□ -1.73
HCFC2-203ENST00000547194 FILIP1Q7Z7B0 1213 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 RNF180Q86T96 592 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 RTN4RL1Q86UN2 441 aaPredicted RBP4.23□□□□□ -1.73
HCFC2-203ENST00000547194 ULK2Q8IYT8 1036 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 E2F7Q96AV8 911 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 FOXRED1Q96CU9 486 aaPredicted RBP4.23□□□□□ -1.73
HCFC2-203ENST00000547194 TMEM176AQ96HP8 235 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 FOXB1Q99853 325 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 ACSS2Q9NR19 701 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 PARPBPQ9NWS1 579 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 MAPRE3Q9UPY8 281 aa4.23□□□□□ -1.73
HCFC2-203ENST00000547194 hCG_2014768A0A024R1R8 64 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 PTPDC1A2A3K4 754 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 ARHGAP6O43182 974 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 KRT37O76014 449 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 F2P00734 622 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 VIL1P09327 827 aaKnown RBP4.22□□□□□ -1.73
HCFC2-203ENST00000547194 ITGB6P18564 788 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 APEX1P27695 318 aaKnown RBP4.22□□□□□ -1.73
HCFC2-203ENST00000547194 MASP1P48740 699 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 MEOX1P50221 254 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 STAT5BP51692 787 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 KIF11P52732 1056 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 C21orf58P58505 322 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 IGBP1P78318 339 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 DSG1Q02413 1049 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 HHEXQ03014 270 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 DUSP8Q13202 625 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 PCOLCEQ15113 449 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
HCFC2-203ENST00000547194 USP30Q70CQ3 517 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 RTKN2Q8IZC4 609 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 AHI1Q8N157 1196 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 CFHR4Q92496 578 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 ERCC4Q92889 916 aaPredicted RBP4.22□□□□□ -1.73
HCFC2-203ENST00000547194 OR10A2Q9H208 303 aa4.22□□□□□ -1.73
HCFC2-203ENST00000547194 METTL14Q9HCE5 456 aaKnown RBP4.22□□□□□ -1.73
HCFC2-203ENST00000547194 ZNF891A8MT65 544 aaPredicted RBP4.21□□□□□ -1.74
HCFC2-203ENST00000547194 H7C1D1 291 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 CYP17A1P05093 508 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 ATP2A2P16615 1042 aaKnown RBP4.21□□□□□ -1.74
HCFC2-203ENST00000547194 ADRA1BP35368 520 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 STAT3P40763 770 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 MRE11P49959 708 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 ANAPC15P60006 121 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 ROM1Q03395 351 aa4.21□□□□□ -1.74
HCFC2-203ENST00000547194 ZNF362Q5T0B9 420 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms