RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 EVPLQ92817 2033 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 A0A0U1RQF3 1178 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 MED19A0JLT2 244 aaPredicted RBP14.46□□□□□ -0.09
SCAF11-208ENST00000546534 EIF4BP23588 611 aaKnown RBP14.46□□□□□ -0.09
SCAF11-208ENST00000546534 ZNF76P36508 570 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 SREBF1P36956 1147 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 NAPAP54920 295 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 TDGQ13569 410 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 TTC22Q5TAA0 569 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 NIPA1Q7RTP0 329 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 TMEM173Q86WV6 379 aaPredicted RBP14.46□□□□□ -0.09
SCAF11-208ENST00000546534 PLA2G4DQ86XP0 818 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 SIX5Q8N196 739 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 FANCBQ8NB91 859 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 TMEM87AQ8NBN3 555 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 ACSF2Q96CM8 615 aaPredicted RBP14.46□□□□□ -0.09
SCAF11-208ENST00000546534 RMDN1Q96DB5 314 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 TMEM87BQ96K49 555 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 RTP3Q9BQQ7 232 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 FBXL21Q9UKT6 434 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 AKT3Q9Y243 479 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 MAFBQ9Y5Q3 323 aaPredicted RBP14.46□□□□□ -0.09
SCAF11-208ENST00000546534 RBM8AQ9Y5S9 174 aaKnown RBP14.46□□□□□ -0.09
SCAF11-208ENST00000546534 IRAK3Q9Y616 596 aa14.46□□□□□ -0.09
SCAF11-208ENST00000546534 FAM86B1E9PN63 330 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 IPO5O00410 1097 aaKnown RBP14.45□□□□□ -0.1
SCAF11-208ENST00000546534 MAGEB2O15479 319 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 SGSM2O43147 1006 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 FAM86B2P0C5J1 330 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 FGFR4P22455 802 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 MCM5P33992 734 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 LIFRP42702 1097 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 ADCY7P51828 1080 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 EFCAB12Q6NXP0 572 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 OTOP3Q7RTS5 596 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 CABP7Q86V35 215 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 LRRC71Q8N4P6 559 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 LINC01465Q8N7H1 131 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 KCNG4Q8TDN1 519 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 BCL7CQ8WUZ0 217 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-208ENST00000546534 MAP7D2Q96T17 732 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 MRPL9Q9BYD2 267 aaKnown RBP14.45□□□□□ -0.1
SCAF11-208ENST00000546534 KCNK12Q9HB15 430 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 DUSP12Q9UNI6 340 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 SLC12A7Q9Y666 1083 aa14.45□□□□□ -0.1
SCAF11-208ENST00000546534 EP300Q09472 2414 aaPredicted RBP14.45□□□□□ -0.1
SCAF11-208ENST00000546534 IGLV3-22A0A075B6J6 115 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 ZC3H11AO75152 810 aaKnown RBP eCLIP14.44□□□□□ -0.1
SCAF11-208ENST00000546534 CTSAP10619 480 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
SCAF11-208ENST00000546534 POLGP54098 1239 aaPredicted RBP14.44□□□□□ -0.1
SCAF11-208ENST00000546534 CCDC149Q6ZUS6 474 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 GPR149Q86SP6 731 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 DDX53Q86TM3 631 aaKnown RBP14.44□□□□□ -0.1
SCAF11-208ENST00000546534 MICU3Q86XE3 530 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 TEX2Q8IWB9 1127 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 WDR70Q9NW82 654 aa14.44□□□□□ -0.1
SCAF11-208ENST00000546534 CNTNAP5Q8WYK1 1306 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 SMCO2A6NFE2 343 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 CSDE1O75534 798 aaKnown RBP14.43□□□□□ -0.1
SCAF11-208ENST00000546534 LMNAP02545 664 aaKnown RBP14.43□□□□□ -0.1
SCAF11-208ENST00000546534 TMOD1P28289 359 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 CLK2P49760 499 aaKnown RBP14.43□□□□□ -0.1
SCAF11-208ENST00000546534 GPC3P51654 580 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 AP3B2Q13367 1082 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 GIT2Q14161 759 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 ZNF746Q6NUN9 644 aaPredicted RBP14.43□□□□□ -0.1
SCAF11-208ENST00000546534 PPP1R18Q6NYC8 613 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 DGLUCYQ7Z3D6 616 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 KIAA2013Q8IYS2 634 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 IGSF21Q96ID5 467 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 LRRC2Q9BYS8 371 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 SEMA4AQ9H3S1 761 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 SFXN1Q9H9B4 322 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 GABBR1Q9UBS5 961 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 CEP131Q9UPN4 1083 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 R4GN57 208 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 VPS13AQ96RL7 3174 aa14.43□□□□□ -0.1
SCAF11-208ENST00000546534 NARSO43776 548 aaKnown RBP14.42□□□□□ -0.1
SCAF11-208ENST00000546534 PSAPP07602 524 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 PTPN14Q15678 1187 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 LONRF3Q496Y0 759 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 ZNF710Q8N1W2 664 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 CRYGNQ8WXF5 182 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 SCLT1Q96NL6 688 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 ZNF577Q9BSK1 485 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 VN1R3Q9BXE9 311 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 NRDE2Q9H7Z3 1164 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 SCUBE2Q9NQ36 999 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 TBC1D22BQ9NU19 505 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 PCDHA10Q9Y5I2 948 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 V9GY48 417 aaPredicted RBP14.42□□□□□ -0.1
SCAF11-208ENST00000546534 ZNF292O60281 2723 aa14.42□□□□□ -0.1
SCAF11-208ENST00000546534 KRBA1A5PL33 1030 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 ZNF862O60290 1169 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 N4BP1O75113 896 aaKnown RBP14.41□□□□□ -0.1
SCAF11-208ENST00000546534 GALTP07902 379 aa14.41□□□□□ -0.1
SCAF11-208ENST00000546534 CFHP08603 1231 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms