RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 MYH6P13533 1939 aa7.9□□□□□ -1.15
CCDC60-205ENST00000546345 DOCK5Q9H7D0 1870 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 CHD8Q9HCK8 2581 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 ATRXP46100 2492 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 KIF28PB7ZC32 967 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 MBTPS2O43462 519 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 ALX3O95076 343 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 NOS3P29474 1203 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 ID4P47928 161 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 PURAQ00577 322 aaKnown RBP7.89□□□□□ -1.15
CCDC60-205ENST00000546345 TIGD5Q53EQ6 642 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 KIAA1211Q6ZU35 1233 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.89□□□□□ -1.15
CCDC60-205ENST00000546345 RPAINQ86UA6 219 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 FBXO16Q8IX29 292 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-205ENST00000546345 UBASH3BQ8TF42 649 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 DDX11Q96FC9 970 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 DYNLL2Q96FJ2 89 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 NUP88Q99567 741 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-205ENST00000546345 SPOCK3Q9BQ16 436 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 SEZ6LQ9BYH1 1024 aa7.89□□□□□ -1.15
CCDC60-205ENST00000546345 H0Y858 1186 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 ATP2A1O14983 1001 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 SRGAP3O43295 1099 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 RRP9O43818 475 aaKnown RBP7.88□□□□□ -1.15
CCDC60-205ENST00000546345 NBL1P41271 181 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 KCNJ6P48051 423 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 AP3B2Q13367 1082 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 POU4F3Q15319 338 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 CLUL1Q15846 466 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 GORABQ5T7V8 394 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 TAPT1Q6NXT6 567 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 SUGP1Q8IWZ8 645 aaKnown RBP7.88□□□□□ -1.15
CCDC60-205ENST00000546345 AGGF1Q8N302 714 aaeCLIP7.88□□□□□ -1.15
CCDC60-205ENST00000546345 DHX38Q92620 1227 aaKnown RBP7.88□□□□□ -1.15
CCDC60-205ENST00000546345 ATOH1Q92858 354 aaPredicted RBP7.88□□□□□ -1.15
CCDC60-205ENST00000546345 CORO1BQ9BR76 489 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 RUSC1Q9BVN2 902 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 CEP44Q9C0F1 390 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 ANTXR1Q9H6X2 564 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 TLR9Q9NR96 1032 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 FRYLO94915 3013 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 FAM208BQ5VWN6 2430 aa7.88□□□□□ -1.15
CCDC60-205ENST00000546345 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 SORBS3O60504 671 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 NBNO60934 754 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 IDH1O75874 414 aaKnown RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 PDGFBP01127 241 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 CXCL10P02778 98 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 EEF2P13639 858 aaKnown RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 MAOBP27338 520 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 RRP1P56182 461 aaKnown RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 ZXDAP98168 799 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 ZNF512BQ96KM6 892 aaPredicted RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 RAD9AQ99638 391 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 SLF1Q9BQI6 1058 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 UPF3BQ9BZI7 483 aaKnown RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 FTOQ9C0B1 505 aaKnown RBP eCLIP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 A1CFQ9NQ94 594 aaKnown RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 CLDND1Q9NY35 253 aa7.87□□□□□ -1.15
CCDC60-205ENST00000546345 DBNLQ9UJU6 430 aaKnown RBP7.87□□□□□ -1.15
CCDC60-205ENST00000546345 TTC3P53804 2025 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 PNMA6EA0A0J9YXQ4 647 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 MEGF11A6BM72 1044 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 LOC730098B7Z3J9 87 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 LINC01565O15544 149 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 IGSF3O75054 1194 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 PROCP04070 461 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 LINC00271P0C7V0 271 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 SUPT20HL2P0C7V6 817 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 GLB1P16278 677 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 AVPR2P30518 371 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 GTF2F1P35269 517 aaKnown RBP eCLIP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 HTRA4P83105 476 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 RBL2Q08999 1139 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 HYAL1Q12794 435 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 SMAD4Q13485 552 aaKnown RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 PKN1Q16512 942 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 EPC2Q52LR7 807 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 TNNI3KQ59H18 835 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 EXOSC6Q5RKV6 272 aaKnown RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 TTC39AQ5SRH9 613 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 HP1BP3Q5SSJ5 553 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 CNKSR3Q6P9H4 555 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 NOL8Q76FK4 1167 aaKnown RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 FAM9BQ8IZU0 186 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 CPXCR1Q8N123 301 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 SDR42E1Q8WUS8 393 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 RMDN1Q96DB5 314 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 TRIM56Q9BRZ2 755 aaKnown RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 NRSN2Q9GZP1 204 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 SH2D4AQ9H788 454 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 SLC38A10Q9HBR0 1119 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 RAVER2Q9HCJ3 691 aaKnown RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 DCP1AQ9NPI6 582 aaPredicted RBP7.86□□□□□ -1.15
CCDC60-205ENST00000546345 MCM9Q9NXL9 1143 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 FAM50BQ9Y247 325 aa7.86□□□□□ -1.15
CCDC60-205ENST00000546345 FPGT-TNNI3KV9GXZ4 949 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms