RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 LSM14BQ9BX40 385 aaKnown RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 RTFDC1Q9BY42 306 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 RBCK1Q9BYM8 510 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TANGO6Q9C0B7 1094 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 RAB17Q9H0T7 212 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 STMN4Q9H169 189 aaPredicted RBP7.05□□□□□ -1.28
SNHG1-225ENST00000545920 GANQ9H2C0 597 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 TMBIM4Q9HC24 238 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 EPB41L5Q9HCM4 733 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 SYNPO2Q9UMS6 1093 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 MYH13Q9UKX3 1938 aa7.05□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC88AQ3V6T2 1871 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 IGKV6D-41A0A0C4DH26 115 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 GOLGA6L10A0A0M3HER8 536 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 ZNF233A6NK53 670 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 CHUKO15111 745 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 EIF3DO15371 548 aaKnown RBP eCLIP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 COBLO75128 1261 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 GGPS1O95749 300 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 TTLL1O95922 423 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 FOSP01100 380 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 AFPP02771 609 aaKnown RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 H2AFZP0C0S5 128 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 GHRP10912 638 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 PDHBP11177 359 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 IL1R1P14778 569 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 TCF3P15923 654 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 LMNB1P20700 586 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 KLK7P49862 253 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 HADHBP55084 474 aaKnown RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 GFPT1Q06210 699 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 ITGB3BPQ13352 177 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 DHX34Q14147 1143 aaKnown RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 MYBPC2Q14324 1141 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 SLC15A2Q16348 729 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 STXBP4Q6ZWJ1 553 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 H2AFVQ71UI9 128 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 NLRP14Q86W24 1093 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 TEX11Q8IYF3 940 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 SH3RF3Q8TEJ3 882 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 FAM20AQ96MK3 541 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 MYCBPQ99417 103 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 PLCD4Q9BRC7 762 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 KCTD10Q9H3F6 313 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 VCPKMTQ9H867 229 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 MTMR4Q9NYA4 1195 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 SEL1LQ9UBV2 794 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 PARP2Q9UGN5 583 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 ARMCX3Q9UH62 379 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 DDX25Q9UHL0 483 aaKnown RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 NENFQ9UMX5 172 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 PCDHA12Q9UN75 941 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 PCDHA2Q9Y5H9 948 aa7.04□□□□□ -1.28
SNHG1-225ENST00000545920 COL5A3P25940 1745 aaPredicted RBP7.04□□□□□ -1.28
SNHG1-225ENST00000545920 NCANO14594 1321 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 PFASO15067 1338 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 SPATA31A5Q5VU36 1347 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 SPATA31A7Q8IWB4 1347 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 MYH8P13535 1937 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 GMNCA6NCL1 334 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 MIF4GDA9UHW6 222 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 H0YHG0 523 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 SMIM22K7EJ46 135 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 EPHB6O15197 1021 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 MARCH6O60337 910 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TLR2O60603 784 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 FAM13AO94988 1023 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 STAU1O95793 577 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 INHAP05111 366 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 GLI1P08151 1106 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 GSTA1P08263 222 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 PLEKP08567 350 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 PLA2G4BP0C869 781 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 TM4SF1P30408 202 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 PDE6BP35913 854 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 FNTAP49354 379 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 CARSP49589 748 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 GDF10P55107 478 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 GSCP56915 257 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 POLR2FP61218 127 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 IRX3P78415 501 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 FOXK2Q01167 660 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 GABPAQ06546 454 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ACTN3Q08043 901 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ZNF543Q08ER8 600 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ADAM9Q13443 819 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 BYSLQ13895 437 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 RAPGEF1Q13905 1077 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 SLMAPQ14BN4 828 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 EXOC3L4Q17RC7 722 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 LACTB2Q53H82 288 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 NAA35Q5VZE5 725 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 ALKBH5Q6P6C2 394 aaKnown RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 C6orf89Q6UWU4 347 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 BTNL9Q6UXG8 535 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 CCDC121Q6ZUS5 278 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 VASH1Q7L8A9 365 aaPredicted RBP7.03□□□□□ -1.28
SNHG1-225ENST00000545920 NPAS3Q8IXF0 933 aa7.03□□□□□ -1.28
SNHG1-225ENST00000545920 LRRC57Q8N9N7 239 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms