RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 KRT76Q01546 638 aa12.49□□□□□ -0.41
CIT-217ENST00000545913 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
CIT-217ENST00000545913 TRPV6Q9H1D0 765 aa12.49□□□□□ -0.41
CIT-217ENST00000545913 DNAJC12Q9UKB3 198 aa12.49□□□□□ -0.41
CIT-217ENST00000545913 ABT1Q9ULW3 272 aaKnown RBP12.49□□□□□ -0.41
CIT-217ENST00000545913 NOP14P78316 857 aaKnown RBP12.48□□□□□ -0.41
CIT-217ENST00000545913 GRAMD1BQ3KR37 738 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 MYBL1P10243 752 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 RNF217Q8TC41 542 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 E2F5Q15329 346 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 TBCCQ15814 346 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 TWF2Q6IBS0 349 aaKnown RBP12.48□□□□□ -0.41
CIT-217ENST00000545913 TMEM270Q6UE05 265 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 ENOSF1Q7L5Y1 443 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 PPP1R16BQ96T49 567 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 HEY1Q9Y5J3 304 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 KCNH2Q12809 1159 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 PTPN21Q16825 1174 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 MORC4Q8TE76 937 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 PIGBQ92521 554 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 MMTAG2Q9BU76 263 aaKnown RBP12.48□□□□□ -0.41
CIT-217ENST00000545913 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
CIT-217ENST00000545913 TCHHQ07283 1943 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 GRID2IPA4D2P6 1211 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 GPC3P51654 580 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 TAP1Q03518 808 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 KNOP1Q1ED39 458 aaKnown RBP12.48□□□□□ -0.41
CIT-217ENST00000545913 TTC17Q96AE7 1141 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 PIH1D3Q9NQM4 214 aaKnown RBP12.48□□□□□ -0.41
CIT-217ENST00000545913 ABCC3O15438 1527 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 KAT6AQ92794 2004 aa12.48□□□□□ -0.41
CIT-217ENST00000545913 CRKP46108 304 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 IMPG1Q17R60 797 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 NBPF9Q3BBW0 867 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 GANCQ8TET4 914 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 NUP85Q9BW27 656 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 GGPS1O95749 300 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 RAD54LQ92698 747 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 LRRC37BQ96QE4 947 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 WNT8AQ9H1J5 351 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 ANLNQ9NQW6 1124 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 ROBO2Q9HCK4 1378 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 CNPY4Q8N129 248 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 NCLNQ969V3 563 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 UNC13BO14795 1591 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 TADA3O75528 432 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 TTLL4Q14679 1199 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 KYAT1Q16773 422 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 APOBEC3FQ8IUX4 373 aaKnown RBP12.47□□□□□ -0.41
CIT-217ENST00000545913 BANK1Q8NDB2 785 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 IP6K2Q9UHH9 426 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 SFI1A8K8P3 1242 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 VAMP7P51809 220 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 FAM83BQ5T0W9 1011 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 PADI6Q6TGC4 694 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 EXT2Q93063 718 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 AIFM3Q96NN9 605 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 MRPL4Q9BYD3 311 aaKnown RBP12.47□□□□□ -0.41
CIT-217ENST00000545913 ABCB6Q9NP58 842 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 DDX56Q9NY93 547 aaKnown RBP12.47□□□□□ -0.41
CIT-217ENST00000545913 A0A0G2JND7 137 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 DENND3A2RUS2 1198 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 SYCE1LA8MT33 242 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 MCF2P10911 925 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 CAPRIN1Q14444 709 aaKnown RBP12.47□□□□□ -0.41
CIT-217ENST00000545913 PASD1Q8IV76 773 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 HACD3Q9P035 362 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 STAP1Q9ULZ2 295 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 PFASO15067 1338 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 ABCB11O95342 1321 aa12.47□□□□□ -0.41
CIT-217ENST00000545913 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
CIT-217ENST00000545913 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
CIT-217ENST00000545913 USP17L5A8MUK1 530 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 SASH1O94885 1247 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 MYL3P08590 195 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.41
CIT-217ENST00000545913 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 E5RI56 91 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 ZFXP17010 805 aaPredicted RBP12.46□□□□□ -0.41
CIT-217ENST00000545913 GNA15P30679 374 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 COASYQ13057 564 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 RUBCNQ92622 972 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.41
CIT-217ENST00000545913 PLA2R1Q13018 1463 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 ATP1A3P13637 1013 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 PRCPP42785 496 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 LZICQ8WZA0 190 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 ACAP3Q96P50 834 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 MTA3Q9BTC8 594 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 CAMSAP1Q5T5Y3 1602 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 POTEMA6NI47 508 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 ASAP2O43150 1006 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 E2F6O75461 281 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 TEDDM1Q5T9Z0 273 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 HIBCHQ6NVY1 386 aaPredicted RBP12.46□□□□□ -0.41
CIT-217ENST00000545913 ING2Q9H160 280 aa12.46□□□□□ -0.41
CIT-217ENST00000545913 BARHL2Q9NY43 387 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms