RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	ADAM15	Q13444	863 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	FZD5	Q13467	585 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	TBR1	Q16650	682 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	BRDT	Q58F21	947 aa	Predicted RBP	7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	SYDE2	Q5VT97	1194 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	FRMD5	Q7Z6J6	570 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	PLEKHH3	Q7Z736	793 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	CBARP	Q8N350	705 aa	Predicted RBP	7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	GAB3	Q8WWW8	586 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	WDR92	Q96MX6	357 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	QRSL1	Q9H0R6	528 aa	Known RBP	7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	CCM2L	Q9NUG4	571 aa	Predicted RBP	7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	PRSS50	Q9UI38	385 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	FAM184B	Q9ULE4	1060 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	SYNPO2	Q9UMS6	1093 aa		7.17	□□□□□ -1.26
LEMD3-205	ENST00000544506	GPR15	P49685	360 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	LGALS4	P56470	323 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	RNF151	Q2KHN1	245 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	ABCB5	Q2M3G0	1257 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	INAVA	Q3KP66	663 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	ZNF568	Q3ZCX4	644 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	USP30	Q70CQ3	517 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	FERMT3	Q86UX7	667 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	OR14C36	Q8NHC7	312 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	ASPSCR1	Q9BZE9	553 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	OR10A2	Q9H208	303 aa		7.16	□□□□□ -1.26
LEMD3-205	ENST00000544506	GABRD	O14764	452 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	SEC24D	O94855	1032 aa	Predicted RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	CNOT4	O95628	575 aa	Known RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	MT-CO1	P00395	513 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	SESN2	P58004	480 aa	Predicted RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	SRSF2	Q01130	221 aa	Known RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	TOR2A	Q5JU69	321 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	ARHGEF18	Q6ZSZ5	1173 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	GAREM2	Q75VX8	874 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	PPP1R14C	Q8TAE6	165 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	STAG1	Q8WVM7	1258 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	RSAD2	Q8WXG1	361 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	RAX2	Q96IS3	184 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	SMAD5	Q99717	465 aa	Known RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	FDXACB1	Q9BRP7	624 aa	Predicted RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	DDX56	Q9NY93	547 aa	Known RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	EVL	Q9UI08	416 aa	Predicted RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506	CDY2A	Q9Y6F7	541 aa		7.15	□□□□□ -1.26
LEMD3-205	ENST00000544506		A0A0G2JLL6	359 aa	Predicted RBP	7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	ARHGAP6	O43182	974 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	HOXA5	P20719	270 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	MRPS9	P82933	396 aa	Known RBP	7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	SPIDR	Q14159	915 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	CCDC178	Q5BJE1	867 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	KCNK18	Q7Z418	384 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	OR14K1	Q8NGZ2	314 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	GFM2	Q969S9	779 aa	Known RBP	7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	OSBPL6	Q9BZF3	934 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	TYW1	Q9NV66	732 aa	Known RBP	7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	DNAJC28	Q9NX36	388 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	DPP7	Q9UHL4	492 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	NR2E1	Q9Y466	385 aa		7.14	□□□□□ -1.27
LEMD3-205	ENST00000544506	C2orf78	A6NCI8	922 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	LAMTOR5	O43504	91 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	PRICKLE3	O43900	615 aa	Predicted RBP	7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	NRP2	O60462	931 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	MYBL2	P10244	700 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	XPA	P23025	273 aa	Predicted RBP	7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	EPHB4	P54760	987 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	PPP2CB	P62714	309 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	PPP2CA	P67775	309 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	NFYC	Q13952	458 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	SURF1	Q15526	300 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	TTLL10	Q6ZVT0	673 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	CLEC14A	Q86T13	490 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	C1orf162	Q8NEQ5	155 aa	Predicted RBP	7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	AUTS2	Q8WXX7	1259 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	TEPSIN	Q96N21	525 aa		7.13	□□□□□ -1.27
LEMD3-205	ENST00000544506	TRIM75P	A6NK02	468 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	FSBP	O95073	299 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	PDGFRB	P09619	1106 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	NRG3	P56975	720 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	CDK17	Q00537	523 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	EXOSC10	Q01780	885 aa	Known RBP	7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	HGFAC	Q04756	655 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	CD69	Q07108	199 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	MGAT5	Q09328	741 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	MAN2A1	Q16706	1144 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	UBXN11	Q5T124	520 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	ZFYVE27	Q5T4F4	411 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	LMBR1L	Q6UX01	489 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	GLB1L2	Q8IW92	636 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	PIK3C3	Q8NEB9	887 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	TSPEAR	Q8WU66	669 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	CFHR4	Q92496	578 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	LPP	Q93052	612 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	MEGF9	Q9H1U4	602 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	RTEL1	Q9NZ71	1219 aa		7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	RBM8A	Q9Y5S9	174 aa	Known RBP	7.12	□□□□□ -1.27
LEMD3-205	ENST00000544506	FZD9	O00144	591 aa		7.11	□□□□□ -1.27
LEMD3-205	ENST00000544506	MATN2	O00339	956 aa		7.11	□□□□□ -1.27

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