RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 COL4A4P53420 1690 aaPredicted RBP15.53■□□□□ 0.08
VAMP1-208ENST00000544432 DGAT1O75907 488 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 MUTP22033 750 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 TECP42680 631 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 GATMP50440 423 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 FXR2P51116 673 aaKnown RBP eCLIP15.52■□□□□ 0.08
VAMP1-208ENST00000544432 POU5F1BQ06416 359 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 LAMTOR4Q0VGL1 99 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 MXD4Q14582 209 aaPredicted RBP15.52■□□□□ 0.08
VAMP1-208ENST00000544432 FAM102BQ5T8I3 360 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 SRGAP1Q7Z6B7 1085 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 ZNF598Q86UK7 904 aaKnown RBP15.52■□□□□ 0.08
VAMP1-208ENST00000544432 FERMT3Q86UX7 667 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 KSR1Q8IVT5 923 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 RSPH1Q8WYR4 309 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 TMEM143Q96AN5 459 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 MTRQ99707 1265 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 TMEM117Q9H0C3 514 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 AAASQ9NRG9 546 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 PLAGL2Q9UPG8 496 aa15.52■□□□□ 0.08
VAMP1-208ENST00000544432 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 POTEMA6NI47 508 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 TBKBP1A7MCY6 615 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 CSDE1O75534 798 aaKnown RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 SKIP12755 728 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 FGFR4P22455 802 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 RPA1P27694 616 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 RARRES1P49788 294 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 TOB1P50616 345 aaPredicted RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 PDIA5Q14554 519 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 PCBP1Q15365 356 aaKnown RBP eCLIP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 CSPP1Q1MSJ5 1256 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 PAN2Q504Q3 1202 aaKnown RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 CATSPER3Q86XQ3 398 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 ERMNQ8TAM6 284 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 NLRP4Q96MN2 994 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 CASD1Q96PB1 797 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 NACC1Q96RE7 527 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 BACH2Q9BYV9 841 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 NSUN3Q9H649 340 aaKnown RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 XPNPEP1Q9NQW7 623 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 RNF19AQ9NV58 838 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 DBR1Q9UK59 544 aaKnown RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.51■□□□□ 0.07
VAMP1-208ENST00000544432 STK24Q9Y6E0 443 aa15.51■□□□□ 0.07
VAMP1-208ENST00000544432 NLRC5Q86WI3 1866 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 BRWD1Q9NSI6 2320 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 LAD1O00515 517 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 GRM6O15303 877 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 NCK2O43639 380 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 ZNF623O75123 536 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 SRGAP2CP0DJJ0 459 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 BMP1P13497 986 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 GJB2P29033 226 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 ARL2P36404 184 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 COL19A1Q14993 1142 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 CATSPER4Q7RTX7 472 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 IFNLR1Q8IU57 520 aaPredicted RBP15.5■□□□□ 0.07
VAMP1-208ENST00000544432 SPPL3Q8TCT6 385 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 TYW1Q9NV66 732 aaKnown RBP15.5■□□□□ 0.07
VAMP1-208ENST00000544432 PCDHB12Q9Y5F1 795 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 NCOR1O75376 2440 aa15.5■□□□□ 0.07
VAMP1-208ENST00000544432 MED24O75448 989 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 ITGB1P05556 798 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 FGFR1P11362 822 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 IBSPP21815 317 aaPredicted RBP15.49■□□□□ 0.07
VAMP1-208ENST00000544432 PRPHP41219 470 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 PHKA2P46019 1235 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 RAB27AP51159 221 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 PTENP60484 403 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 UBE3AQ05086 875 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 PTGDRQ13258 359 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 RILPL1Q5EBL4 403 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 HAUS3Q68CZ6 603 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 TWF2Q6IBS0 349 aaKnown RBP15.49■□□□□ 0.07
VAMP1-208ENST00000544432 KLHL23Q8NBE8 558 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 RNF149Q8NC42 400 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 PIGOQ8TEQ8 1089 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 CCDC43Q96MW1 224 aaKnown RBP15.49■□□□□ 0.07
VAMP1-208ENST00000544432 NFKBIZQ9BYH8 718 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 CWH43Q9H720 699 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 AGPAT5Q9NUQ2 364 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 PIN4Q9Y237 131 aaKnown RBP15.49■□□□□ 0.07
VAMP1-208ENST00000544432 MYO7AQ13402 2215 aa15.49■□□□□ 0.07
VAMP1-208ENST00000544432 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-208ENST00000544432 LAG3P18627 525 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 TFF2Q03403 129 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 CUL4AQ13619 759 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 CAMK1Q14012 370 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 TFDP1Q14186 410 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 NBR1Q14596 966 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 TCEAL5Q5H9L2 206 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 CLLU1OSQ5K130 101 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 ABI1Q8IZP0 508 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 IGSF22Q8N9C0 903 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 MCPH1Q8NEM0 835 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 RAB34Q9BZG1 259 aa15.48■□□□□ 0.07
VAMP1-208ENST00000544432 UBE2ZQ9H832 354 aaPredicted RBP15.48■□□□□ 0.07
VAMP1-208ENST00000544432 MINDY3Q9H8M7 445 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms