RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 A0A1W2PQ64 194 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 A0A1W2PQD8 194 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 DPYSL4O14531 572 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 SUPT3HO75486 399 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 MYL1P05976 194 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 MAP4P27816 1152 aaKnown RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 INPP5AQ14642 412 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 BEND6Q5SZJ8 279 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 OR6B3Q8NGW1 331 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 NFU1Q9UMS0 254 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 PRG3Q9Y2Y8 225 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 IKBKBO14920 756 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 SEC24DO94855 1032 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 NNMTP40261 264 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ANO4Q32M45 955 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CYP26B1Q9NR63 512 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ASNSD1Q9NWL6 643 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 CLCA2Q9UQC9 943 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ARFIP2P53365 341 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 TBL3Q12788 808 aaKnown RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 PSMD2Q13200 908 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 EMBQ6PCB8 327 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 LRRC31Q6UY01 552 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 ILDR1Q86SU0 546 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 TBC1D19Q8N5T2 526 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 FAM167BQ9BTA0 163 aa11.07□□□□□ -0.64
PCDH9-204ENST00000544246 FOXP1Q9H334 677 aaPredicted RBP11.07□□□□□ -0.64
PCDH9-204ENST00000544246 C5orf58C9J3I9 102 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 EIF3DO15371 548 aaKnown RBP eCLIP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 GCFC2P16383 781 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 MTERF2Q49AM1 385 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 FAM47EQ6ZV65 393 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 MSTO1Q9BUK6 570 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 GEMIN8Q9NWZ8 242 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 MPP6Q9NZW5 540 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 RASSF10A6NK89 507 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 C16orf96A6NNT2 1141 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 hCG_1984214I3L0E3 225 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 FKBP3Q00688 224 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ZNF713Q8N859 430 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ABCB6Q9NP58 842 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 FGGP02679 453 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 CDH2P19022 906 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 DEFA1P59665 94 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 DEFA3P59666 94 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 DCAF4L1Q3SXM0 396 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ARMC2Q8NEN0 867 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 NDFIP2Q9NV92 336 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 TMEM161AQ9NX61 479 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 POLIQ9UNA4 740 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 PCDHA5Q9Y5H7 936 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ADGRL2O95490 1459 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ARHGEF40Q8TER5 1519 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ZNF197O14709 1029 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 TBC1D4O60343 1298 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 BRD2P25440 801 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ADD1P35611 737 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 PPP6R3Q5H9R7 873 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 THAP11Q96EK4 314 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 TMEM245Q9H330 911 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 MAN1B1Q9UKM7 699 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 BCS1LQ9Y276 419 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 USP19O94966 1318 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 CCDC188H7C350 402 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 ZBED6P86452 979 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 TRIM71Q2Q1W2 868 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 GPATCH4Q5T3I0 446 aaKnown RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 STAMBPL1Q96FJ0 436 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 PPP1R16BQ96T49 567 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 MTMR6Q9Y217 621 aa11.06□□□□□ -0.64
PCDH9-204ENST00000544246 FARP1Q9Y4F1 1045 aaPredicted RBP11.06□□□□□ -0.64
PCDH9-204ENST00000544246 PIK3R2O00459 728 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 HNRNPRO43390 633 aaKnown RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 PYGMP11217 842 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 RPS8P62241 208 aaKnown RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 CUL3Q13618 768 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 SLFN12LQ6IEE8 588 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 TAS2R42Q7RTR8 314 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 SPTLC3Q9NUV7 552 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 H2AFY2Q9P0M6 372 aaPredicted RBP11.05□□□□□ -0.64
PCDH9-204ENST00000544246 METP08581 1390 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 ADGBQ8N7X0 1667 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 RALBP11234 206 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 RAD23BP54727 409 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 TFDP2Q14188 446 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 CNBD2Q96M20 576 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 PARVGQ9HBI0 331 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 EMILIN3Q9NT22 766 aa11.05□□□□□ -0.64
PCDH9-204ENST00000544246 AURKCQ9UQB9 309 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms