RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 HYIQ5T013 277 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 MCPH1Q8NEM0 835 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 MYLIPQ8WY64 445 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 AK8Q96MA6 479 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 PNMA5Q96PV4 448 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 PRDM12Q9H4Q4 367 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 MINDY3Q9H8M7 445 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 CERS4Q9HA82 394 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 RC3H2Q9HBD1 1191 aaKnown RBP24.21■■□□□ 1.47
OTUB1-212ENST00000543988 C1orf112Q9NSG2 853 aa24.21■■□□□ 1.47
OTUB1-212ENST00000543988 C9IYK1 514 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 ASAP2O43150 1006 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 CYP11B2P19099 503 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 GLRA2P23416 452 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 GRB10Q13322 594 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 SLC24A5Q71RS6 500 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 DNM3Q9UQ16 869 aa24.2■■□□□ 1.46
OTUB1-212ENST00000543988 COL4A6Q14031 1691 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 EYA4O95677 639 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 MARCKSP29966 332 aaPredicted RBP24.19■■□□□ 1.46
OTUB1-212ENST00000543988 LONP1P36776 959 aaKnown RBP24.19■■□□□ 1.46
OTUB1-212ENST00000543988 PHKA2P46019 1235 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 TMEM119Q4V9L6 283 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 FAM102BQ5T8I3 360 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 CATSPER4Q7RTX7 472 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 CABP7Q86V35 215 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 PLIN2Q99541 437 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 INO80BQ9C086 356 aaPredicted RBP24.19■■□□□ 1.46
OTUB1-212ENST00000543988 FBXO2Q9UK22 296 aaPredicted RBP24.19■■□□□ 1.46
OTUB1-212ENST00000543988 LOXHD1Q8IVV2 1947 aa24.19■■□□□ 1.46
OTUB1-212ENST00000543988 ADGRA3Q8IWK6 1321 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 EPOPA6NHQ4 379 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 DGKIO75912 1065 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 F13A1P00488 732 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 PDIA4P13667 645 aaKnown RBP24.18■■□□□ 1.46
OTUB1-212ENST00000543988 PTENP60484 403 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 TFDP1Q14186 410 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 SRGAP1Q7Z6B7 1085 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 ARNTL2Q8WYA1 636 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 CDK5RAP3Q96JB5 506 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 MTUS1Q9ULD2 1270 aa24.18■■□□□ 1.46
OTUB1-212ENST00000543988 PIN4Q9Y237 131 aaKnown RBP24.18■■□□□ 1.46
OTUB1-212ENST00000543988 TTC3P53804 2025 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 STAG3L1P0CL83 205 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 ZSCAN20P17040 1043 aaPredicted RBP24.17■■□□□ 1.46
OTUB1-212ENST00000543988 UBA7P41226 1012 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 NASPP49321 788 aaPredicted RBP24.17■■□□□ 1.46
OTUB1-212ENST00000543988 GATMP50440 423 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 FAM189BP81408 668 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 BSNDQ8WZ55 320 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 RUSC1Q9BVN2 902 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 CSRNP2Q9H175 543 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 LRFN2Q9ULH4 789 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 STXBP5LQ9Y2K9 1186 aa24.17■■□□□ 1.46
OTUB1-212ENST00000543988 FOSL2P15408 326 aa24.16■■□□□ 1.46
OTUB1-212ENST00000543988 SLC39A14Q15043 492 aa24.16■■□□□ 1.46
OTUB1-212ENST00000543988 IFNLR1Q8IU57 520 aaPredicted RBP24.16■■□□□ 1.46
OTUB1-212ENST00000543988 ZNF689Q96CS4 500 aaPredicted RBP24.16■■□□□ 1.46
OTUB1-212ENST00000543988 TGS1Q96RS0 853 aaKnown RBP24.16■■□□□ 1.46
OTUB1-212ENST00000543988 NT5C3AQ9H0P0 336 aa24.16■■□□□ 1.46
OTUB1-212ENST00000543988 AGPAT5Q9NUQ2 364 aa24.16■■□□□ 1.46
OTUB1-212ENST00000543988 PCDHB7Q9Y5E2 793 aa24.16■■□□□ 1.46
OTUB1-212ENST00000543988 SRPRBQ9Y5M8 271 aaKnown RBP24.16■■□□□ 1.46
OTUB1-212ENST00000543988 MORC2Q9Y6X9 1032 aaPredicted RBP24.16■■□□□ 1.46
OTUB1-212ENST00000543988 LRRIQ4A6NIV6 560 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 SLC26A4O43511 780 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 ERVK-21P61565 698 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 MBTD1Q05BQ5 628 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 POU5F1BQ06416 359 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 ADGRE1Q14246 886 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 KARSQ15046 597 aaKnown RBP24.15■■□□□ 1.46
OTUB1-212ENST00000543988 FOXD4L6Q3SYB3 417 aaPredicted RBP24.15■■□□□ 1.46
OTUB1-212ENST00000543988 FOXD4L3Q6VB84 417 aaPredicted RBP24.15■■□□□ 1.46
OTUB1-212ENST00000543988 LRRC15Q8TF66 581 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 ZNF396Q96N95 335 aaPredicted RBP24.15■■□□□ 1.46
OTUB1-212ENST00000543988 CLIC6Q96NY7 704 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 C17orf80Q9BSJ5 609 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 POLD4Q9HCU8 107 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 CHST12Q9NRB3 414 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 TMEM161AQ9NX61 479 aa24.15■■□□□ 1.46
OTUB1-212ENST00000543988 INO80B-WBP1J3KQ70 363 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 RFXAPO00287 272 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 SSBP05455 408 aaKnown RBP eCLIP24.14■■□□□ 1.45
OTUB1-212ENST00000543988 BTG3Q14201 252 aaPredicted RBP24.14■■□□□ 1.45
OTUB1-212ENST00000543988 BECN1Q14457 450 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 PAN2Q504Q3 1202 aaKnown RBP24.14■■□□□ 1.45
OTUB1-212ENST00000543988 SPECC1Q5M775 1068 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 TWF2Q6IBS0 349 aaKnown RBP24.14■■□□□ 1.45
OTUB1-212ENST00000543988 USP49Q70CQ1 688 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 ECHDC2Q86YB7 292 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 KCTD17Q8N5Z5 321 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 CALML4Q96GE6 196 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 NFKBIZQ9BYH8 718 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 DACT1Q9NYF0 836 aa24.14■■□□□ 1.45
OTUB1-212ENST00000543988 TFIP11Q9UBB9 837 aaKnown RBP24.14■■□□□ 1.45
OTUB1-212ENST00000543988 TSPAN1O60635 241 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 PLA2G4BP0C869 781 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 FGFR1P11362 822 aa24.13■■□□□ 1.45
OTUB1-212ENST00000543988 ATF7P17544 494 aaPredicted RBP24.13■■□□□ 1.45
OTUB1-212ENST00000543988 PLCG1P19174 1290 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms