RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 LBX2Q6XYB7 198 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 INTS8Q75QN2 995 aaKnown RBP18.61■□□□□ 0.57
PTPRO-209ENST00000543886 IRF2BP2Q7Z5L9 587 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
PTPRO-209ENST00000543886 ANKRD13CQ8N6S4 541 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 TMEM174Q8WUU8 243 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 ZNF446Q9NWS9 450 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 OGFRQ9NZT2 677 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 ADAMTS1Q9UHI8 967 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 ARID2Q68CP9 1835 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 SRGAP2O75044 1071 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 NAP1L1P55209 391 aaKnown RBP18.61■□□□□ 0.57
PTPRO-209ENST00000543886 ACTR2P61160 394 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 PTK2Q05397 1052 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 CAGE1Q8TC20 777 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 KIFAP3Q92845 792 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 ELP3Q9H9T3 547 aa18.61■□□□□ 0.57
PTPRO-209ENST00000543886 TISP43B9A030 160 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 ZNF862O60290 1169 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 ANXA13P27216 316 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 PRKCIP41743 596 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 CBWD6Q4V339 395 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 CBWD3Q5JTY5 395 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 CBWD5Q5RIA9 395 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 GJB7Q6PEY0 223 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 VPS36Q86VN1 386 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 RIOX2Q8IUF8 465 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 HVCN1Q96D96 273 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 CAPZA3Q96KX2 299 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 CBWD1Q9BRT8 395 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 INTS2Q9H0H0 1204 aaKnown RBP18.6■□□□□ 0.57
PTPRO-209ENST00000543886 HSPBP1Q9NZL4 362 aa18.6■□□□□ 0.57
PTPRO-209ENST00000543886 SEPT9Q9UHD8 586 aaPredicted RBP18.6■□□□□ 0.57
PTPRO-209ENST00000543886 AJAP1Q9UKB5 411 aaPredicted RBP18.6■□□□□ 0.57
PTPRO-209ENST00000543886 SORBS3O60504 671 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 EIF3JO75822 258 aaKnown RBP18.59■□□□□ 0.57
PTPRO-209ENST00000543886 FERP16591 822 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 NF2P35240 595 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 STAT1P42224 750 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 IRX3P78415 501 aaPredicted RBP18.59■□□□□ 0.57
PTPRO-209ENST00000543886 PRKCEQ02156 737 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 C10orf76Q5T2E6 689 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 ZNF571Q7Z3V5 609 aaPredicted RBP18.59■□□□□ 0.57
PTPRO-209ENST00000543886 OTUD5Q96G74 571 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 C17orf75Q9HAS0 396 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 KMT5AQ9NQR1 393 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 BTBD7Q9P203 1132 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 SNX12Q9UMY4 172 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
PTPRO-209ENST00000543886 NPTX2P47972 431 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 VAMP7P51809 220 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 CNTN2Q02246 1040 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 PPATQ06203 517 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 KIAA0753Q2KHM9 967 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 ABHD15Q6UXT9 468 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 CCDC60Q8IWA6 550 aaPredicted RBP18.59■□□□□ 0.57
PTPRO-209ENST00000543886 PROCA1Q8NCQ7 364 aaPredicted RBP18.59■□□□□ 0.57
PTPRO-209ENST00000543886 MCPH1Q8NEM0 835 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 RPGRIP1Q96KN7 1286 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 TBX20Q9UMR3 447 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 DAAM1Q9Y4D1 1078 aa18.59■□□□□ 0.57
PTPRO-209ENST00000543886 A0A0G2JLL6 359 aaPredicted RBP18.58■□□□□ 0.57
PTPRO-209ENST00000543886 BUB1O43683 1085 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 DGAT1O75907 488 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 SUPT20HL2P0C7V6 817 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 CETN1Q12798 172 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 BMS1Q14692 1282 aaKnown RBP18.58■□□□□ 0.57
PTPRO-209ENST00000543886 NAB2Q15742 525 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 PRRT2Q7Z6L0 340 aaPredicted RBP18.58■□□□□ 0.57
PTPRO-209ENST00000543886 ERO1BQ86YB8 467 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 TMEM161BQ8NDZ6 487 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 ANKZF1Q9H8Y5 726 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 SALL4Q9UJQ4 1053 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 DNAJC12Q9UKB3 198 aa18.58■□□□□ 0.57
PTPRO-209ENST00000543886 IRF6O14896 467 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 MAPK13O15264 365 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 STBD1O95210 358 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 RHOXF2BP0C7M4 288 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 ICAM3P32942 547 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 ALDH5A1P51649 535 aaPredicted RBP18.58■□□□□ 0.56
PTPRO-209ENST00000543886 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
PTPRO-209ENST00000543886 C9orf131Q5VYM1 1079 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 NCAPG2Q86XI2 1143 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 FMNL3Q8IVF7 1028 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 ANKRD13AQ8IZ07 590 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 MSANTD4Q8NCY6 345 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 SPIRE2Q8WWL2 714 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 MMS19Q96T76 1030 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 RHOXF2Q9BQY4 288 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 KIFC3Q9BVG8 833 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 STK33Q9BYT3 514 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 SPATC1LQ9H0A9 340 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 ATP6V0A4Q9HBG4 840 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 CYP26B1Q9NR63 512 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 APEX2Q9UBZ4 518 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 TELO2Q9Y4R8 837 aa18.58■□□□□ 0.56
PTPRO-209ENST00000543886 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
PTPRO-209ENST00000543886 DENND3A2RUS2 1198 aa18.57■□□□□ 0.56
PTPRO-209ENST00000543886 F8VZ95 297 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms