RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 NR5A1Q13285 461 aa8□□□□□ -1.13
NUP43-206ENST00000543637 TFDP1Q14186 410 aa8□□□□□ -1.13
NUP43-206ENST00000543637 DSC3Q14574 896 aa8□□□□□ -1.13
NUP43-206ENST00000543637 NPY5RQ15761 445 aa8□□□□□ -1.13
NUP43-206ENST00000543637 B3GNT9Q6UX72 402 aa8□□□□□ -1.13
NUP43-206ENST00000543637 ANO5Q75V66 913 aa8□□□□□ -1.13
NUP43-206ENST00000543637 TMC7Q7Z402 723 aa8□□□□□ -1.13
NUP43-206ENST00000543637 SRGAP1Q7Z6B7 1085 aa8□□□□□ -1.13
NUP43-206ENST00000543637 RBM23Q86U06 439 aaKnown RBP8□□□□□ -1.13
NUP43-206ENST00000543637 FAM178BQ8IXR5 827 aa8□□□□□ -1.13
NUP43-206ENST00000543637 DIS3L2Q8IYB7 885 aaKnown RBP8□□□□□ -1.13
NUP43-206ENST00000543637 GJD3Q8N144 294 aa8□□□□□ -1.13
NUP43-206ENST00000543637 LINC01465Q8N7H1 131 aa8□□□□□ -1.13
NUP43-206ENST00000543637 COLGALT1Q8NBJ5 622 aa8□□□□□ -1.13
NUP43-206ENST00000543637 PSPC1Q8WXF1 523 aaKnown RBP8□□□□□ -1.13
NUP43-206ENST00000543637 DYDC2Q96IM9 177 aa8□□□□□ -1.13
NUP43-206ENST00000543637 NLRP4Q96MN2 994 aa8□□□□□ -1.13
NUP43-206ENST00000543637 CASD1Q96PB1 797 aa8□□□□□ -1.13
NUP43-206ENST00000543637 FAM193BQ96PV7 902 aaPredicted RBP8□□□□□ -1.13
NUP43-206ENST00000543637 MTRQ99707 1265 aa8□□□□□ -1.13
NUP43-206ENST00000543637 TTC12Q9H892 705 aaPredicted RBP8□□□□□ -1.13
NUP43-206ENST00000543637 TLR9Q9NR96 1032 aa8□□□□□ -1.13
NUP43-206ENST00000543637 GJB4Q9NTQ9 266 aa8□□□□□ -1.13
NUP43-206ENST00000543637 SPG21Q9NZD8 308 aa8□□□□□ -1.13
NUP43-206ENST00000543637 PRKAG3Q9UGI9 489 aa8□□□□□ -1.13
NUP43-206ENST00000543637 CD207Q9UJ71 328 aa8□□□□□ -1.13
NUP43-206ENST00000543637 COL4A3BPQ9Y5P4 624 aa8□□□□□ -1.13
NUP43-206ENST00000543637 COL6A3P12111 3177 aa8□□□□□ -1.13
NUP43-206ENST00000543637 TDRD15B5MCY1 1934 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 TMEM150BA6NC51 233 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 NEMFO60524 1076 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 ERLIN2O94905 339 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 SLITRK3O94933 977 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 STBD1O95210 358 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 LINC00271P0C7V0 271 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 XRCC6P12956 609 aaKnown RBP eCLIP7.99□□□□□ -1.13
NUP43-206ENST00000543637 IL9P15248 144 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 COL9A1P20849 921 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 NRIP1P48552 1158 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 NPEPPSP55786 919 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 HMGN5P82970 282 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 PLCB3Q01970 1234 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 RNASELQ05823 741 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 CTTNQ14247 550 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 MXD4Q14582 209 aaPredicted RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 PLA2G4FQ68DD2 849 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 KCNT2Q6UVM3 1135 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 CCDC83Q8IWF9 413 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 LRRC43Q8N309 656 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 CNNM3Q8NE01 707 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 NSUN7Q8NE18 718 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 ERMNQ8TAM6 284 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 URGCPQ8TCY9 931 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 HELQQ8TDG4 1101 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 PRPF31Q8WWY3 499 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 MRPS27Q92552 414 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 HAS1Q92839 578 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 C8orf76Q96K31 380 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 POP1Q99575 1024 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 CDCA3Q99618 268 aaPredicted RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 EIF2AK1Q9BQI3 630 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 LLPHQ9BRT6 129 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 LXNQ9BS40 222 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 CWH43Q9H720 699 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 UPF2Q9HAU5 1272 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 NGRNQ9NPE2 291 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 ENTPD7Q9NQZ7 604 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 SH2B1Q9NRF2 756 aaPredicted RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 ANKEF1Q9NU02 776 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 RGL1Q9NZL6 768 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 KANSL3Q9P2N6 904 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 VAV3Q9UKW4 847 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 NOL7Q9UMY1 257 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 PIN4Q9Y237 131 aaKnown RBP7.99□□□□□ -1.13
NUP43-206ENST00000543637 LZTS1Q9Y250 596 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 KIF3AQ9Y496 699 aa7.99□□□□□ -1.13
NUP43-206ENST00000543637 PI4K2BG5E9Z4 385 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 MBTPS2O43462 519 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 DTNBO60941 627 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 ZNF623O75123 536 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 DGAT1O75907 488 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 LARGE1O95461 756 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 SEC24BO95487 1268 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 ALDH2P05091 517 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 DNAJB1P25685 340 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 AXLP30530 894 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 MCM7P33993 719 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 PHKA2P46019 1235 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 GUCY1B3Q02153 619 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 CYP4A11Q02928 519 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 DRP2Q13474 957 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 GIT2Q14161 759 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 PCBP1Q15365 356 aaKnown RBP eCLIP7.98□□□□□ -1.13
NUP43-206ENST00000543637 CLUL1Q15846 466 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 CTC1Q2NKJ3 1217 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 TMEM31Q5JXX7 168 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 GLB1LQ6UWU2 654 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 ADGRD2Q7Z7M1 963 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 KSR1Q8IVT5 923 aa7.98□□□□□ -1.13
NUP43-206ENST00000543637 HACE1Q8IYU2 909 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms